Bombus terrestris (buff-tailed bumblebee): 100647794
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Entry
100647794 CDS
T04364
Name
(RefSeq) ATP-dependent RNA helicase DHX8
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
bter
Bombus terrestris (buff-tailed bumblebee)
Pathway
bter03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bter00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100647794
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bter03041
]
100647794
Enzymes [BR:
bter01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
100647794
Spliceosome [BR:
bter03041
]
Complex C
Other components
Step II factors
100647794
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
S1
Helicase_C
HA2_N
DEAD
AAA_22
GIPC1_GH2
AAA_19
nSTAND3
AAA_30
AAA_16
PhoH
Motif
Other DBs
NCBI-GeneID:
100647794
NCBI-ProteinID:
XP_003401914
UniProt:
A0A9B0F694
LinkDB
All DBs
Position
16:4904377..4909162
Genome browser
AA seq
1197 aa
AA seq
DB search
MDEVSKLEHLSLVSKICTELENHLGLNDKDLAEFIIHLAEKNDTFDKFKKVLIENGAEFS
ESFMANLLRIIQHMKPTKLEEKSLKPPTKQDELAQKFPALALPNEEPKIVDEKELKDDDI
VSSAMASLEELAPSKKSNKEDSKKENQSIDNNDKKNKHTRRSRSRDRRRHRSRSSGRRDR
RHRSRSRSRSRDRSRSRDRRRHRSRDRKRSRSRDRKFHRDKYSNKLDRSRSRSVEELSMD
PEVGKIYSGKVANIVPFGCFVQLEGLKRRWEGLVHISQLRREGRVASASDVVSRGQKVLV
KVLNIGGQKVSLSMKDVDQETGRDLNPVVAVTKTEEDEKHLRNPDRPTSLLELQGNWDED
ETYSRKRVQRLSSPEKWEIKQMLAASCIDRSELPEFDTETGILPREDDEEEDVEIELVEE
EPPFLHGHGRALGDLSPVRIVKNPDGSLAQAAMMQSALAKERREQKMLQREQEMDSVPTG
LNKNWIDPLPEAESRTLAANMRGIGLQTQDLPEWKKHVIGGKKSSFGKKTNLTLLEQRQS
LPIYKLRDDLVKAVTDNQILIVIGETGSGKTTQITQYLAEAGFTARGKIGCTQPRRVAAM
SVAKRVAEEFGCRLGQEVGYTIRFEDCTGPETNIKYMTDGMLLRECLMDLDLKTYSVIML
DEAHERTIHTDVLFGLLKQAVGRRPDLKLIVTSATLDAVKFSQYFFEAPIFTIPGRTFEV
EVMYTKEPETDYLDAALITVMQIHLREPPGDILLFLTGQEEIDTACEILYERMKSLGPDV
PELIILPVYSALPSEMQTRIFEPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKV
YNSKTGMDSLIVTPISQAAAKQRAGRAGRTGPGKCYRLYTERAYRDEMLPTPVPEIQRTN
LATTVLQLKTMGINDLLHFDFMDAPPVESLIMALESLHSLSALDNEGLLTRLGRRMAEFP
LEPNLSKMLIMSVHLQCSDEILTIVSMLSVQNVFYRPKDKQALADQKKAKFNQPEGDHLT
LLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDVVSAGKNTVRIQ
KAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEWVIYHELVQTTKEYMRE
VTTIDPKWLVEFAPAFFKFSDPTKLSKFKKNQRLEPLYNKYEEPNAWRISRVRRRRN
NT seq
3594 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagtctcaaaactggaacatctatctttggtttcaaaaatatgcacggaattg
gaaaatcacttaggactaaatgacaaagatttggctgaattcataatccatttggcagag
aaaaatgatacatttgataaatttaaaaaagttcttattgaaaatggcgctgaattttct
gaatcttttatggccaatttgctaagaataatacagcatatgaagccaactaaactggag
gagaaatcattgaaacctccgacaaagcaagatgaactagctcaaaaattccctgccctg
gcactgccaaacgaggaaccaaaaattgtggatgaaaaagaactcaaagacgatgatata
gtcagcagtgctatggcaagtttggaggaactagcaccatcaaaaaagtctaataaggaa
gatagcaagaaagagaaccaatcaatcgataataatgataagaagaacaaacacacaaga
agaagtagatcaagagatagaagaagacacagatcacgttcatcaggtcgcagagacaga
aggcataggtctagatctcgttcaaggtcacgagatcgttcaagatctagagatagaaga
cgtcacaggtccagagatcgtaaaagatctagatcacgagacagaaaatttcatagggac
aaatattccaataaactggatcgatctagatcgcgatctgtagaggaactttccatggat
ccagaagtaggcaagatttattcaggcaaagtagctaatatcgttccttttggttgtttt
gttcaattggagggtttgaaacgaaggtgggaagggcttgttcatatctcacaattaaga
agggaaggaagagtcgccagtgctagcgatgtagtatctaggggtcagaaggtgctcgtg
aaagtccttaatattggtggacaaaaggtttctttaagtatgaaggatgttgatcaggaa
accggcagggatctgaatcctgttgtggctgttaccaaaactgaagaagatgagaaacat
ttgagaaatccagatagacctacttccttgttagaactccaaggtaattgggacgaggac
gaaacttattctagaaaacgtgtgcaaagattgtcttctccagaaaagtgggaaattaaa
caaatgcttgctgcatcttgcatcgataggagtgaattgccagaattcgataccgaaaca
ggaatcctcccacgagaagacgatgaagaagaagacgttgaaatagagttagtggaagaa
gagccaccatttttacatggccatggaagagctcttggagacttaagtcctgttcgcata
gtaaaaaatcctgatggttctttagcgcaagctgcaatgatgcagagtgctttagcaaaa
gaaaggagggaacaaaaaatgttgcaaagagaacaggaaatggattctgttccaacaggt
ctgaacaaaaattggattgaccctctaccagaagctgaaagtagaactctagctgcgaac
atgcgtggaatcggccttcaaacacaagatttgcctgagtggaagaaacacgtgatagga
ggaaaaaagtcttcttttggaaagaaaacaaatttaactcttcttgaacagcgccagagc
ttaccaatatataaactcagggatgatttagttaaagctgtgacggataatcaaatttta
atcgtaattggagaaacagggtcaggaaagaccacgcaaattacacagtatttagcagaa
gcaggattcacagcccgtggaaagattggctgtactcaacctagaagagtggctgccatg
tcagttgccaaaagagtggcggaagaattcggttgtcgtttaggacaagaagttggctac
acgattcgttttgaagactgtactggtccagaaaccaacataaagtatatgactgatggt
atgttgctaagagaatgtctcatggatttggatttgaagacatactctgtaattatgttg
gatgaggcacatgaacgtaccattcacacggacgttctttttggattgctgaaacaagct
gtagggagaaggccagatttaaaactaatcgttacaagtgcaactttggatgctgtcaaa
ttttcacaatacttcttcgaagcaccaatcttcactattcctggtagaacattcgaagta
gaagtcatgtataccaaagaaccagaaacagactatctggatgccgcactgataacagta
atgcagatacatttgagagaacctccaggagacatacttctattcctaactggtcaagaa
gaaatcgacacagcttgtgaaattttatacgaacgtatgaaatctttaggccctgatgtt
ccagagttaatcattttgcccgtgtattcggcgcttccatcggagatgcagacgagaata
tttgaaccagctccacctggttccagaaaagtggtaatagccaccaatatagcggaaact
agtttgactatcgatggaatttattacgtagttgatccaggatttgtgaaacagaaggtc
tataattctaaaactggaatggatagtcttatagtaacaccaataagccaagcagctgcg
aaacaaagagcagggagggctggcagaactggtccaggaaaatgttatagactttatacc
gaaagggcttatagggacgaaatgcttccgacgccggttccagaaatccaacgtactaat
ttagcaaccacggtattacaactaaagactatgggcatcaatgatctattacactttgat
tttatggatgctccacctgtcgaatcgctgattatggctttggaatctctgcacagctta
agtgcattagataacgaaggtttattaaccagattaggaagaaggatggcagagtttcct
ctagaacctaatttatctaagatgcttattatgagcgtacatcttcaatgttctgacgag
atattgaccatcgtcagcatgttatctgttcagaacgtcttctacagaccgaaagataag
caagctttagcagatcaaaagaaagcaaaattcaaccaaccggagggcgatcatttaact
ctgttggcagtttataactcctggagaaataataaatttagtaatgcatggtgttatgaa
aattttgtgcaaattagaactttaaaacgcgctcaggatgttcggaaacaactattaggt
ataatggacagacacaaattggacgtagtatctgcgggtaaaaatactgtaagaattcag
aaagctgtttgttctggtttcttcagaaacgccgcaaagaaagatcctcaagaaggatat
agaaccttggtagatagccaagttgtctacattcatccaagtagcgcgttatttaacaga
caaccggaatgggtaatttatcatgaattggtccaaactacgaaagaatacatgagggaa
gtgacaactatagacccaaaatggttagtagagtttgcgccagcatttttcaaatttagc
gatccgaccaaacttagcaagtttaagaagaatcaaagattggaaccactttataataag
tacgaagaaccgaacgcttggcgaatatcaagggttcgaagaagacgtaattaa
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integrated database retrieval system
