Bombus terrestris (buff-tailed bumblebee): 100647830
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Entry
100647830 CDS
T04364
Name
(RefSeq) ATP-dependent RNA helicase me31b
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
bter
Bombus terrestris (buff-tailed bumblebee)
Pathway
bter03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bter00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100647830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bter03019
]
100647830
03036 Chromosome and associated proteins [BR:
bter03036
]
100647830
Enzymes [BR:
bter01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100647830
Messenger RNA biogenesis [BR:
bter03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
100647830
mRNA degradation factors
5'-3' decay
Decapping complex
100647830
Chromosome and associated proteins [BR:
bter03036
]
Eukaryotic type
Gene silencing
piRNA pathway
100647830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Motif
Other DBs
NCBI-GeneID:
100647830
NCBI-ProteinID:
XP_003402776
UniProt:
A0A9B0C401
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All DBs
Position
6:complement(16574293..16582662)
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AA seq
444 aa
AA seq
DB search
MMTETHINSNHVLNSGLNTKSEIDKMDDVGWKAKLKIPPKDKRIKTSDVTDTRGNEFEEF
CLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDILARAKNGTGKTGAYSIPVLEQVDPR
KDVIQALVLVPTRELALQTSQICIELAKHMDIKVMVTTGGTDLRDDIMRIYQTVQVIIAT
PGRILDLMDKNVANMDHCKTLVLDEADKLLSQDFKGMLDHVISRLPHERQILLYSATFPL
TVKQFMEKHLRDPYEINLMEELTLKGVTQYYAFVQERQKVHCLNTLFSKLQITQSIIFCN
STQRVELLAKKITDLGYCCYYIHAKMAQAHRNRVFHDFRAGLCRNLVSSDLFTRGIDVQA
VNVVINFDFPKMAETYLHRIGRSGRFGHLGIAINLITYEDRFNLHRIEQELGTEIKPIPK
VIDPSLYVARPEDNNSMEEGNVSK
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgatgacagaaacacatataaattccaatcatgtcctaaattctggtttgaataccaaa
tcagaaatagacaaaatggacgatgtgggttggaaagccaaattaaaaattccaccaaag
gacaaacgaattaaaactagtgatgttactgatactcgtggcaatgaatttgaggagttt
tgcctaaaacgagaattattaatgggcatctttgaaaaaggttgggaaaagccttcccca
attcaagaagccagtattcctattgcattatctggtaaagatatcttggctcgtgcgaaa
aatgggactggtaaaactggggcctattcaattccagtgctagaacaggttgatccacga
aaagatgtgattcaggcactagtacttgtacccactagagagttagctcttcagacatcg
caaatttgcattgaactggcaaaacatatggacataaaagtaatggtaactactggagga
acagacttacgggatgacattatgaggatttaccagacagtacaagtaataatagcaacg
ccaggaagaattcttgaccttatggacaagaatgttgcaaatatggatcattgtaaaact
ctagttttggatgaagcagataaactactgtcgcaagattttaaagggatgttggatcat
gtcatttccagattaccacatgaacgtcaaatactgctgtattcagctacatttcccctg
acagtgaaacaattcatggaaaaacacttaagagatccatatgagattaatttaatggaa
gaactcacattgaaaggtgtaacacaatattacgcctttgtacaagaacgacaaaaagtt
cattgtcttaatacactgttctccaagttgcaaataacacaaagcataatattctgcaat
tcaacacaacgtgttgaattactcgcaaaaaagataacagatcttggatattgctgttat
tacatacacgcgaaaatggcgcaggcacaccgaaatcgcgtgttccatgattttcgagca
ggactatgcagaaacttggtgagcagtgatctgtttactcgtggtattgatgtacaagct
gtgaacgtcgttatcaattttgactttccaaaaatggcagagacataccttcatcgtatc
ggccgatcaggacgattcggtcacttaggtatagcaattaacctaatcacgtacgaagac
cgttttaacttacatcgtatcgaacaagagcttggaacagagattaaacctattccaaag
gtaatagatccaagtttgtatgtagcaagaccagaagacaataatagcatggaagagggt
aatgtgtctaagtag
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