Bombus terrestris (buff-tailed bumblebee): 100648096
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Entry
100648096 CDS
T04364
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 20
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
bter
Bombus terrestris (buff-tailed bumblebee)
Pathway
bter03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bter00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100648096
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bter03041
]
100648096
03009 Ribosome biogenesis [BR:
bter03009
]
100648096
Enzymes [BR:
bter01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100648096
Spliceosome [BR:
bter03041
]
Complex A
U1 snRNP components
U1 related factors
100648096
Complex B
100648096
Ribosome biogenesis [BR:
bter03009
]
Eukaryotic type
Pre-60S particles
Helicases
100648096
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
TFIIA
DUF6505
Motif
Other DBs
NCBI-GeneID:
100648096
NCBI-ProteinID:
XP_003397328
UniProt:
A0A9B0BL68
LinkDB
All DBs
Position
8:8565967..8580086
Genome browser
AA seq
714 aa
AA seq
DB search
MYNNSYSNRTSYRPRGSRDSSNRNGGGTYWNSQQQQKEKSLKKQVQRRTPGDSLKKPIWD
LAKLPVITKNLYIPHINVLKRSTDEVTKYHIGKEITVKGNNTPSPIQAFEESNFPDYVME
EIRKQGFAEPTAIQAQGWPIALSGRDLVGIAQTGSGKTLAYILPATVHINNQPRLNRGEG
PIVLILAPTRELAQQIQSVARDFGSSSCIRNTCIFGGSPKGPQARDLERGVEICIATPGR
LIDFLEKGTTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWPKEVQ
ALAEDFLSDYIQINIGSLTLAANHNIRQIIEICQEHEKETKLSGLLREIGKDRGSKMIIF
VETKKKVDDITKAIKREGWPAISIHGDKSQPERDYVLSEFRNGKTMILVATDVAARGLDV
EDVKYVINFDYPNSSEDYIHRIGRTGRCQSAGTAYAYFTPNNARQAKELISVLEEAGQTI
NPQLADLANSIKPAYGKGRQRWSHSRSNKDSNSTGSPRNNSSPISNNWQAQHVQSTQHNG
NSQERTVVRQQNAYQTNRQNTFQSNYQQHQQQSQQQQQHQQHQQQQHQRQSNTYTNSCQT
SNSYQAGYQNANIPRYHGRTGGFQSNRYHNRQNAYSTNQTAGGQSVYSMPPPFMMPSAGG
HTDSGMQSLVNNKFFQTNRPPPNTGACAYQSMGYSQFQAVPPYTYPYPPTPVQQ
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgtataacaacagttattccaatcgtaccagttacagacccaggggaagtagagactct
agcaatcgtaatggaggaggaacatattggaacagccagcaacaacaaaaagagaagtca
cttaagaagcaagtccaaagaaggactcctggagattcattgaagaagcctatatgggat
ctggctaaattaccagtgatcacaaagaatttatatattccacatatcaatgttttaaaa
agatcaaccgatgaagttaccaaatatcacattggtaaagaaatcactgtaaaaggaaac
aatactccttctccaattcaagcgttcgaagaaagtaacttcccagattacgtgatggaa
gagattagaaagcagggctttgctgaaccaacagcaattcaggcacagggctggccaata
gcacttagtggacgcgacttggttggaattgctcaaacaggatctggaaaaactctagct
tatattttaccagcaaccgtacacattaataatcaaccacgtttgaaccggggagagggg
ccgatcgttttaatacttgccccaacaagagagttagctcagcaaattcaatccgttgct
agggactttggttcctcctcgtgcattcgtaacacttgcattttcggtggttccccgaaa
ggacctcaagctcgcgatttagagcgcggcgttgagatatgtatcgcaactcccggtaga
ctgatcgattttctcgagaagggaaccacgaacttgcgcagatgcacatatcttgtattg
gatgaggcagatagaatgttggatatgggattcgagccgcaaattcgaaagattattgaa
caaattagacctgatagacaggtattgatgtggtcggcgacatggcccaaagaagtgcaa
gctttggctgaagatttcctctcagattacattcaaattaacataggttctctgacgttg
gctgctaatcacaatattcgtcaaatcatagagatttgtcaagagcacgagaaagaaact
aaactttcaggtctattgagagaaattggcaaagacagaggaagcaagatgattattttt
gttgaaacgaaaaagaaggtggacgacatcaccaaagctattaaacgagaaggttggcca
gctatctctattcatggtgacaaatcacaacctgaaagagattacgtgttatccgagttc
agaaacggaaaaacaatgatccttgttgctaccgatgttgctgctcgtggcttggatgtt
gaagacgtaaagtatgtaattaatttcgattatccgaacagttctgaggattatattcac
cgaatagggagaaccggacgttgccaaagtgcaggtacagcatatgcttactttacgcct
aataacgccagacaagcgaaggaactgatttctgttctggaagaagctggtcagacgata
aatcctcaactggcagatttagcaaactcgataaaacctgcgtatggtaagggccgccaa
cgttggagtcattctcgctctaataaggatagtaattcaactggaagtcctcgaaacaat
agcagtcctatttcaaacaattggcaggctcaacatgttcaaagtactcaacataatggt
aacagtcaagaaaggactgttgtacgccaacaaaatgcataccagaccaaccgccagaat
actttccaatctaattatcagcaacaccaacaacagtcacagcagcagcaacaacaccaa
cagcatcagcagcaacaacatcaacgacaatcgaatacttatacaaacagctgtcaaact
agcaatagttaccaagctggctatcagaatgcaaatatacctagataccatggaagaaca
ggtggtttccaaagtaatcgttaccataatcgccagaacgcatacagcactaatcaaaca
gctggaggacaaagcgtgtattctatgccacctccgttcatgatgccatctgctggtgga
cacacagattcaggaatgcagagtcttgtaaacaataagtttttccagacaaatcgtcca
ccaccgaataccggggcctgcgcataccaatcaatgggatacagccagttccaggctgtg
ccgccgtatacttatccttatccgcctacaccggtacagcagtga
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