Bombus terrestris (buff-tailed bumblebee): 100648348
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Entry
100648348 CDS
T04364
Name
(RefSeq) ATP-dependent RNA helicase DDX55 isoform X5
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
bter
Bombus terrestris (buff-tailed bumblebee)
Brite
KEGG Orthology (KO) [BR:
bter00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bter03009
]
100648348
Enzymes [BR:
bter01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100648348
Ribosome biogenesis [BR:
bter03009
]
Eukaryotic type
Pre-60S particles
Helicases
100648348
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
CTT_SPB4
ResIII
Cas3-like_C_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
100648348
NCBI-ProteinID:
XP_020723478
UniProt:
A0A9C6SU93
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Position
2:complement(10400788..10406958)
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AA seq
589 aa
AA seq
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MKTQNWKELELPLSDSVLKTIEELNFPYMTPVQAASIPLLLKGKDVAAEAVTGSGKTIAF
LVPLLEILQKRNEKWKPIEIGAIIISPTRELAIQINEVLQKFLDNIPDLKQALLVGGTTI
AEDADKLKAGANIIIATPGRLEDMLSNCKSINLTAYVKSLEVLILDEADRLLDLGFSATL
DTILSYLPRLRRTGLFSATQTKELQQLIRAGLRNPALITVKEKPNISTPSNLINNYVIVN
AEYKLSIMIDFIQHKGTDLKYMIFLSTCACVDYFSHVTQTMLPTIQVFAIHGKMKNKRYK
VFNDFRSIESGILICTDVMARGIDISEVDWVLQYDPPCSASSFVHRCGRTARIGNQGNAL
LFLLKTEDAYVEFIKRNQKVDLQQIVLEPSIISYKKCLMCMRNLQKQDRSFFDKANRAFV
SYIQAYNKHECNLILRLKDIDLGKLAMGFGLLRMPRMPELKGKDMSNFQEEDTDINSITY
SDKQKEKSRLEKLKIFRDTGIWPKAQKRKCKQTEPWSENKKKKMEKQENRKKRKEKKMKQ
KMSENSTKKRKRKMNEQDIKDLAKDIALIKKLKKKKISQEEFDTAFGTD
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacacaaaattggaaagaattagaattgcctttaagtgattctgtattaaaaacc
attgaagagttgaactttccttatatgacacccgtgcaggcagcttccataccattacta
ctaaaaggaaaagatgttgctgcagaagcagtaacagggagtggaaaaacaattgcgttt
ttagttccactcttagagatattgcagaaaagaaatgaaaaatggaaacctatagaaatt
ggagcaataataatcagtcctacaagagaattggctatccaaataaatgaagttttgcaa
aagtttctggataatataccagatttaaaacaagcattacttgttggtggtacaacaatt
gcagaagatgcagataaacttaaggctggagcaaatattattatagccacacctggtcga
ttagaagatatgttgtctaattgcaaaagtataaacttgacagcatatgtaaaatctttg
gaagtactgatcttagatgaagctgacagattattagatctaggtttttctgcaacgtta
gatacaatattatcttatttaccacgtctcagaagaacaggtttattttctgcaactcaa
acaaaggaattgcagcagttaataagagctggacttagaaacccagctctgataactgtt
aaagaaaaaccaaatatttctacaccttcgaatttaataaataattatgtcattgtaaat
gctgaatataaattatctataatgatagattttattcagcataaagggactgatttaaaa
tatatgatttttttatccacttgtgcttgtgttgattattttagtcatgttacacaaaca
atgttgccaactattcaagtatttgcaattcatggcaaaatgaaaaacaagcggtacaaa
gtattcaacgattttcgatctattgaaagtggaattttaatttgtacagatgtaatggct
cgtggtattgacatttcagaagttgattgggtattacaatatgatcctccatgttcagca
agtagttttgttcatagatgtggtagaacagctagaataggtaaccaaggaaatgcattg
ttatttctcttaaaaacagaagatgcatacgtagaatttattaaaagaaatcaaaaagta
gatctacagcaaatagttttggagccatccattatttcatacaaaaagtgtttaatgtgt
atgagaaatttacaaaaacaagatcgctctttttttgacaaggccaacagagcatttgta
tcatatatccaggcatacaataagcatgaatgtaatttaatattaagattgaaagatatt
gatctaggaaagcttgcaatgggttttgggttattacgaatgcctcgtatgccggaactt
aaaggaaaagatatgtcaaattttcaagaagaagatactgatatcaattcaattacatat
tcagataaacaaaaagaaaaaagtcgtttagaaaaattaaagatttttcgagatactgga
atatggcctaaggcacagaaacgtaaatgtaaacaaactgaaccatggtctgaaaataaa
aaaaagaaaatggaaaagcaagaaaatcgtaaaaaaaggaaagagaaaaaaatgaagcag
aagatgtcagaaaactcaacaaaaaagcgaaaaagaaagatgaatgaacaagatatcaaa
gatttagcaaaagacatagcattaattaaaaagttaaaaaagaaaaagatttcacaagaa
gaatttgataccgcttttggaactgattga
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