Bombus terrestris (buff-tailed bumblebee): 100648868
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Entry
100648868 CDS
T04364
Name
(RefSeq) CCR4-NOT transcription complex subunit 3 isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
bter
Bombus terrestris (buff-tailed bumblebee)
Pathway
bter03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bter00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100648868
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bter03019
]
100648868
Messenger RNA biogenesis [BR:
bter03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
100648868
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
100648868
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Baculo_PEP_C
V-SNARE
Motif
Other DBs
NCBI-GeneID:
100648868
NCBI-ProteinID:
XP_003397972
UniProt:
A0A9B0BZ67
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All DBs
Position
9:18049057..18054022
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AA seq
684 aa
AA seq
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MAATRKLQGEIDRCLKKVTEGVETFEDIWQKVHNATNSNQKEKYEADLKKEIKKLQRLRD
QIKTWLASGEIKDKSTLLEYRKLIETQMERFKVVERETKTKAYSKEGLGAAQKLDPAQKE
REEVSNWLANSIDALNLQLDTFESEIESLLAGKKKRLDKDKQDRMDELKAKLDKHRYHIR
KLETLLRMLDNMSVEVNTIKRIKDDVEYYIESSQEPDFEENEYIYDDIIGLDEVELSGVG
IPSSATTDSNNSNETGGTPTSTNSGTSPIPSPPLSSTMHNHSSDSSTDNDKKTKPVKPTA
VRPLLNSQASIPTTGNTATIKSNLLSSSTPSKTIPMTPSHSSPSSTSNHIATTNAGNFAT
VAASHTNSQAIHSTSSKTSSHSSENGLLSSSSASSVTSNVPQTTSQQHSNPVPIQTTHVL
HNQQNQNHSSETEMTTPIPPSSSPQSSVSSRSSPLPANSCSPAPSTANGLIPKLPDGMSS
LKSIAQQVIVRAGLDIPPSESNRNIFDTAKANNNNSKVTMEAHIPPLLSVAPLGPVPLQK
EHQLQFQLMEAAHYHMPHPSDSERLRSYLPRNSCVTPSYYQQSQLPHSDTVEFFQRLSTE
TLFFIFYYMEGSKGQYLAAKALKKQSWRFHTKYMMWFQRHEEPKVINEEYEQGTYIYFDY
EKWGQRKKEGFTFEYKYLEDRDLN
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgacgagaaagttgcaaggtgaaatagatcggtgccttaaaaaagtaacggag
ggtgtagagacatttgaagatatttggcaaaaggttcataatgctacaaacagcaatcag
aaggagaaatatgaagcagatctcaagaaagaaatcaaaaaacttcaaaggttacgtgat
cagattaaaacctggcttgcatcaggtgaaattaaggataaaagtacgcttcttgaatat
agaaagttaattgaaactcaaatggaaaggtttaaagttgtggagagagagacaaaaaca
aaagcttattcgaaagaaggattaggagctgctcaaaaacttgatccagctcaaaaagaa
cgagaagaagttagcaattggcttgcaaattctatagacgctttaaatcttcagctggat
acatttgaatccgagatagaatcattactcgcaggaaagaaaaaaaggttagataaagat
aagcaggataggatggatgaattaaaagcaaaacttgataaacatcgttaccatatccgt
aaattggaaacattgttacgcatgttggacaatatgtctgttgaagttaacactattaag
aggataaaagatgatgtagagtattatatcgaatcctcgcaggaacctgattttgaggaa
aatgaatatatctacgatgatattattggtctcgatgaagttgagttgtctggagttggt
attccctcatcagcaactacagatagtaataatagcaacgaaactggaggtacaccaacc
tcaactaactctggtacttcacccataccatcacctccattgagttctaccatgcataac
cattcgagtgatagttctacagataatgacaaaaaaacgaagcctgtgaaaccaacagca
gtcaggccattattaaattcacaggcgagcattccaaccacgggaaacactgccaccata
aaatcgaatttattatcaagcagcactccaagcaagaccattcccatgacacctagccat
agctcgcctagttctacaagtaatcacattgctacaactaatgctggtaattttgctaca
gtagctgcatcacatactaattcacaagccatccattctacctctagtaaaacatcttct
catagcagtgaaaatggtttattgtcatcatcgtctgcgtctagtgttacctcgaatgtg
ccacaaacaacctcgcagcagcatagtaatccagtgcccatacagacgacacatgtgttg
cataatcaacaaaatcagaatcacagcagcgaaactgaaatgacaacgccgatcccacca
tcttcttcgccacagtcgtcagtcagcagtagatcttcacctttgcccgcaaattcctgc
tcgccagcgccatccactgccaatggtctcatccctaagcttcctgatggcatgtcctct
ttgaaatctatagcccaacaagtaattgtccgagcaggtttggacataccgccgtccgag
tcgaacagaaacatctttgacactgctaaggcgaacaataataacagcaaagtcaccatg
gaagcacacattcctcctcttcttagcgttgcgcctctcgggccagtacctcttcagaaa
gaacaccagttgcagttccagttgatggaggccgcccactaccatatgcctcatccatct
gattctgaacgtttgcgatcatatttaccaagaaattcgtgtgttacaccttcttattat
caacagagtcaacttccccattctgatactgtggagttcttccaacgtctttccacggaa
acgttgttcttcatattttattacatggaaggttctaaaggccagtacctggctgcaaaa
gctctaaagaaacaaagttggaggtttcatacaaagtatatgatgtggtttcagaggcac
gaagaacccaaagtgatcaacgaggaatatgagcagggaacctacatttatttcgattat
gaaaagtggggacaaagaaaaaaggaaggttttacatttgagtacaagtacttagaggac
agagatctgaattaa
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