Bombus terrestris (buff-tailed bumblebee): 100649117
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Entry
100649117 CDS
T04364
Name
(RefSeq) E3 ubiquitin-protein ligase parkin
KO
K04556
parkin [EC:
2.3.2.31
]
Organism
bter
Bombus terrestris (buff-tailed bumblebee)
Pathway
bter04120
Ubiquitin mediated proteolysis
bter04137
Mitophagy - animal
bter04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
bter00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
100649117
04120 Ubiquitin mediated proteolysis
100649117
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
100649117
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bter04131
]
100649117
04121 Ubiquitin system [BR:
bter04121
]
100649117
03029 Mitochondrial biogenesis [BR:
bter03029
]
100649117
Enzymes [BR:
bter01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
100649117
Membrane trafficking [BR:
bter04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
100649117
Aggrephagy
Other aggrephagy associated proteins
100649117
Xenophagy
Other xenophagy associated proteins
100649117
Ubiquitin system [BR:
bter04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
100649117
Mitochondrial biogenesis [BR:
bter03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
100649117
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_14
IBR_2
zf-RING_12
ubiquitin
IBR_1
IBR
Rad60-SLD
Motif
Other DBs
NCBI-GeneID:
100649117
NCBI-ProteinID:
XP_003400798
UniProt:
A0A9B0C180
LinkDB
All DBs
Position
14:complement(7345081..7347918)
Genome browser
AA seq
498 aa
AA seq
DB search
MSFFFDFIRNVFLKMLQLIWFSKRKLTNSLSIYVKTNTGNTFPVDLDPKWDIKNVKEIVA
FQMGISPEDIKIIFAGKELHNSTIIEECDLGQQSILHAIRTSSQRLNKNRDTNTIDESLE
ISELNDSGGKPMNETLTDLPLDESDPQENLTMEEKHGNPAHFFVYCSTPCKAVTVGKLRV
RCATCNSGAVTVDRDPQCWPDVLQPKRITVHCENDFCPAPTFISSDTESQVLYARFYFKC
GKHASLGEGDEAVPLYLIKPNLGRIPCLACTDVRDMVLVFPCEAGHVTCLDCFKDYCSIR
LRERQFQFDDIKGYYTLPCPTGCQNSFIPEVHHFRLLTSEQYEQYQRFSTEEYVLRAGGV
LCPRPDCGMGIIPESPDDDSEECRKIQCIGGCGYVFCRQCLQGYHLGECELQPSESLNTI
HKSGYSVDPRRANDAKWDEASNKTIRILTKPCPKCRTPTERDGGCMHMVCTRAGCNYHWC
WVCQTEWTRDCMGNHWFG
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgagtttcttctttgacttcatacggaatgtgtttcttaagatgttacaactaatttgg
tttagtaaacgaaaattaacaaattcattgagtatatacgtgaaaaccaatactggaaat
acattccccgttgatttggacccaaaatgggatataaagaacgtaaaagagatagtggca
tttcaaatgggaatatcacctgaagacataaaaataatatttgcagggaaagagctgcat
aattcaacgataatagaagaatgcgatttgggtcaacaaagtatattacatgcaattcga
acttcatcacagaggttaaataaaaatagagatactaacaccattgacgagtctttggaa
atatctgaattaaatgatagcggaggaaagccaatgaatgaaactcttactgatttacca
ttagatgaatcagatccacaagaaaatttaaccatggaagagaaacatggaaatccagca
catttttttgtatattgttcaacaccatgcaaagctgtcacagttggtaaattaagagtc
agatgtgcaacctgtaatagtggagcagttacggtagatagagatcctcagtgttggcca
gatgtattacaaccaaaaagaataacagttcattgtgaaaatgatttttgtccagcaccc
acatttatatccagtgacactgaatcccaagttttatatgcacgtttttatttcaaatgt
gggaaacatgctagtttaggagaaggagatgaggctgttcctttgtatcttataaaacca
aatttaggaagaataccttgccttgcctgtacagatgttagggatatggtcttggtcttc
ccatgtgaagctggccatgtaacttgccttgattgtttcaaagactattgttcaattcgt
ctaagagaacgtcaatttcaatttgatgacattaaaggatattatacgcttccatgccca
acaggatgtcaaaattctttcattccagaagtacatcattttcgtcttcttacctctgag
cagtacgaacagtatcagagatttagtacagaagaatatgttttacgtgctggtggagtt
ttatgtccaagaccagattgtggcatgggcattataccagaatcaccagatgatgatagt
gaagaatgtagaaagattcaatgtattggtggttgtgggtacgttttttgtagacaatgt
ttacaaggctaccatttaggagaatgtgaattacaaccatctgagtctttgaatacaata
cataaatctgggtattcagttgatccacggagagctaacgatgcaaaatgggatgaagcc
agcaataaaactattagaattttaacaaaaccttgtccaaagtgtagaacaccaactgaa
agagatggaggatgcatgcacatggtttgtactagagctggatgtaattaccattggtgc
tgggtatgtcagacggaatggacaagagactgcatgggcaatcattggtttggataa
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