Bombus terrestris (buff-tailed bumblebee): 100649159
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Entry
100649159 CDS
T04364
Name
(RefSeq) general transcription factor IIH subunit 1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
bter
Bombus terrestris (buff-tailed bumblebee)
Pathway
bter03022
Basal transcription factors
bter03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bter00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
100649159
09124 Replication and repair
03420 Nucleotide excision repair
100649159
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bter03021
]
100649159
03400 DNA repair and recombination proteins [BR:
bter03400
]
100649159
Transcription machinery [BR:
bter03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
100649159
DNA repair and recombination proteins [BR:
bter03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
100649159
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_TFIIH
BSD
Motif
Other DBs
NCBI-GeneID:
100649159
NCBI-ProteinID:
XP_048267394
UniProt:
A0A9C6SJJ5
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All DBs
Position
2:complement(10379216..10383977)
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AA seq
560 aa
AA seq
DB search
MTTSSEDVLMQVGQVRYKKGDGTLYVMNERIAWMLDNRDTVSVSHKYADIKLQKISPEGK
SKIQLQVVLHDGSSSIFHFVNRNGQEAQIKDRDDVKELLQQLLPKFKRKVNKELEEKNRM
LQENPVLLQLYRDLVITQVISSEEFWSQHAAEYTQAKKSQRQEIGVNSAFLADIKPQTDG
CNGLKYNLTVDIIECIFKTYPAVKRKHQENVPHKMSESDFWTKFFQSHYFHRDRINAGTK
DLFTECAKIDDQELKKDIQSGIDDPLVDITSFEDQTLDDNYGNGPSKSDKVSGNIVHQSM
IKRFNQHSIMVLKASTAKQSTQSIQPQLNGSTPSASKTTTLSNQLDERPKKKLRIQEKLI
YDDLDTTHDINTNNSAPLNLNHIDRYLHGPVPGYGNTEPTSEELLMTLNQLRKEVSGWLA
GNSIPRQLATSLVSPAAAVSALGELTPGGSLMKGFREESLGQLIPKDLERELRNVYVCTC
ELLRHFWRSFPPTTPQLEEKAIRMHEALHRFHSAKLKPFEDRVQRDFSAVSQHLTSHLNQ
LLNTAYRKFAVWQQRKMQMR
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgactacatcatcggaagatgttctaatgcaagtaggacaagttcgttataaaaaagga
gatggcactttatatgtcatgaatgaaagaatagcctggatgcttgataacagagacact
gtatcagtcagccacaaatatgctgacattaagttacaaaagatatcaccagaaggaaaa
tcaaaaatacaattacaagttgtattacatgatggttcatcatctatatttcattttgta
aacagaaatgggcaagaggcacaaattaaagatcgtgatgatgtaaaagaattacttcag
caattattaccaaaatttaaaagaaaagtaaataaagaattggaagaaaaaaatagaatg
cttcaagaaaatcctgtattgcttcagttatacagagatttggttattacacaagttatt
tcatctgaagaattttggtcacaacatgctgcagaatatacccaagctaaaaaaagtcaa
agacaagaaataggagtaaatagtgcttttctggctgatataaaaccacaaactgatggt
tgtaatggattgaaatataatttaactgttgatattatagagtgtatatttaagacttat
ccagcagtaaaaagaaaacatcaagaaaatgtgcctcataaaatgtcagaatctgatttt
tggacaaaattctttcagtcacattattttcatcgagatcgtatcaatgcagggaccaag
gatctttttaccgaatgtgccaaaatagatgatcaagaacttaaaaaagatattcaatcg
ggtattgatgatccattggtggatataacttcttttgaggatcaaactctagatgataat
tatgggaatggacctagtaaatctgacaaagtttcaggaaatattgtacatcaaagtatg
attaagagatttaatcaacatagtatcatggttttaaaggccagcactgccaagcaatct
acacaatccattcaaccacaattaaatggatcaacgccatcagcaagtaaaactacaaca
ctgtctaatcagttagatgaacgaccaaagaaaaaacttagaatacaagaaaaattaatt
tatgatgatcttgataccactcatgatattaatacaaataatagtgcaccattaaatttg
aatcatatagacaggtatttacatggtccagtgccaggatatggtaatacggaaccgacg
tctgaagaacttcttatgacattaaatcaattaagaaaggaagtaagtggttggctggca
ggaaatagtataccaaggcaattagcaacatcattagttagcccagctgcagcagtctct
gccctaggagaattaactccaggtggttctttaatgaaaggcttcagagaagaaagtctt
ggacaattaataccaaaggatttagaaagagaactacgtaatgtatatgtgtgtacatgt
gaacttctaaggcatttttggcgaagtttcccacctacaactccacagcttgaagaaaaa
gctattagaatgcacgaagcattacatagatttcattctgctaaacttaaaccttttgaa
gatcgtgttcaacgagatttttctgctgttagtcaacatttaacaagtcatttaaatcaa
ctattaaatacagcatatagaaaattcgcagtttggcaacaacgtaagatgcaaatgagg
tag
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