Bombus terrestris (buff-tailed bumblebee): 100649172
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Entry
100649172 CDS
T04364
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit isoform X1
KO
K07466
replication factor A1
Organism
bter
Bombus terrestris (buff-tailed bumblebee)
Pathway
bter03030
DNA replication
bter03420
Nucleotide excision repair
bter03430
Mismatch repair
bter03440
Homologous recombination
bter03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
bter00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
100649172
03420 Nucleotide excision repair
100649172
03430 Mismatch repair
100649172
03440 Homologous recombination
100649172
03460 Fanconi anemia pathway
100649172
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bter03000
]
100649172
03032 DNA replication proteins [BR:
bter03032
]
100649172
03400 DNA repair and recombination proteins [BR:
bter03400
]
100649172
Transcription factors [BR:
bter03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
100649172
DNA replication proteins [BR:
bter03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
100649172
DNA repair and recombination proteins [BR:
bter03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
100649172
MMR (mismatch excision repair)
100649172
DSBR (double strand breaks repair)
HR (homologous recombination)
100649172
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
CDC24_OB3
IBR
Motif
Other DBs
NCBI-GeneID:
100649172
NCBI-ProteinID:
XP_003395799
UniProt:
A0A9B0BNJ2
LinkDB
All DBs
Position
5:complement(1621166..1624839)
Genome browser
AA seq
595 aa
AA seq
DB search
MYSLTEGALDKIMNGIEVDRPILQILGHKKLSSSNSGERYRLLVSDGKRINSFTMLATQL
NSMITDNVLTEFSICQINRYAISVVNNAGKQKRVMVILSVDLKVAGDEVGHKIGNPTNAD
ADGESKPAQSVQSAQTTSQQQSSLVSKHSGQQSSTSDISTIPIVALSPYQNRWVIKARVV
NKSAIRTWSNSRGEGKLFSMDLVDESGEIRCTAFRDQCDKFYDMIEIGKVYYISRATLKT
ANKQFNNLKNDYEMSLTGDSEIIPCHDIGDKIPTLQFDFIPINDIEQKEKNDIIDILAIV
KSRGDLQMLVSRTTGKDMKKRDINLIDESNTMVTLTLWGTQAEEFSGNDNPVLAIKGARV
GEFNGGKNLSTLSGTAVQIDPDIPEAHRLRGWFNTTGCHEEAKPLSRAFGSAAQMSQALI
TIGEANSQIDKKIGPEIFTVKATINLLRTENILYKSCPSENCKKKVIDQANGMYRCEKCN
KEFPNFKYRLLGSLSLADWTDNMWVTAFNDETEKILGITAQELGELKENDNDAYLEKLGD
VTFKSFIFKIRTKMETFGDENRLRSTCIDVSPTDCKAYNEDLITKLKELTGIDSI
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgtattcacttacggaaggagcattggataaaatcatgaacgggatcgaggtcgatagg
ccgatattgcaaatattgggtcacaagaaattatctagttcaaatagtggagaacgttac
agacttctcgtatctgatggaaaacgaataaattcatttacgatgcttgccacgcaatta
aattcaatgataaccgataatgtattaacagaattttccatttgccaaataaatagatat
gctataagcgtggtaaataatgctggcaaacaaaaacgagtaatggtgatattaagtgtt
gatttaaaagttgcgggtgatgaagttggacataaaattggtaatccaacaaatgctgat
gctgatggtgaatctaaaccagcacaaagtgtacagtctgcgcaaactacttcacaacag
caaagtagcttggtgtcaaagcatagtggtcaacaatcttctaccagtgatatatccaca
atcccaatcgttgcattgagtccttatcaaaacaggtgggtaataaaggcacgagttgtc
aataaatctgccattagaacgtggagtaattcacgtggtgaaggaaaattgttttccatg
gatcttgtagacgaaagtggagagattagatgcactgcatttagagatcagtgtgataaa
ttctatgatatgattgagattgggaaggtttattacatttccagagcaactttaaaaaca
gcaaataagcagtttaataatttaaaaaacgattatgaaatgtctctaactggcgattca
gaaataattccatgccatgacattggggataagattccaactcttcagtttgattttata
ccaataaacgatatagagcaaaaggagaaaaatgatataatagatattttggctattgta
aaatctcgtggtgatttgcagatgttagtatcacgaactactggtaaagacatgaaaaaa
agggatattaatctcattgatgaaagtaatactatggtaacgcttacactatggggaaca
caagctgaagaattttcaggaaatgataatccagttttagccattaaaggagctcgtgtt
ggcgaatttaatggtggaaagaatttatctactctcagtggaactgctgtgcagattgat
ccagatattccagaagcacatagattacgaggttggtttaacacaactggatgtcatgaa
gaagcaaagccactttcaagagcatttggaagtgcagctcaaatgtctcaggcattgatc
acaattggcgaagcaaacagtcagatagataaaaagatcggtccggaaatatttacggtg
aaggcgaccattaatcttttacgcactgaaaatattttatataaatcgtgccctagtgaa
aactgcaaaaaaaaggtgatagatcaagcaaatggcatgtacaggtgcgaaaaatgtaat
aaagaattccctaacttcaaatatcgtttacttggaagcctaagcttggctgactggaca
gataatatgtgggtcacagcatttaatgacgaaacagagaaaattttaggtattacagct
caggaacttggagaattaaaagaaaatgataacgatgcttacctggaaaaacttggcgat
gtaacatttaaaagtttcatatttaagataagaacgaaaatggaaacattcggtgatgaa
aacaggttaagatcaacatgtattgatgtatccccaactgattgtaaagcctacaacgaa
gacttaataaccaaactcaaagaattaactggtattgatagtatttaa
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