Bombus terrestris (buff-tailed bumblebee): 100649185
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Entry
100649185 CDS
T04364
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
bter
Bombus terrestris (buff-tailed bumblebee)
Pathway
bter03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bter00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100649185
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bter03041
]
100649185
Spliceosome [BR:
bter03041
]
Complex A
U1 snRNP components
U1 related factors
100649185
Complex B
100649185
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
RhoGAP-FF1
HVO_2833_C
DP-EP
Motif
Other DBs
NCBI-GeneID:
100649185
NCBI-ProteinID:
XP_012169081
UniProt:
A0A9B2JPZ0
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All DBs
Position
11:complement(10334931..10338558)
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AA seq
837 aa
AA seq
DB search
MASNDGIPPPAAVPGFPPATPNIASTFVPPIMPTAPFIPPPSLPPGPPGIMPPQFSIPPP
GFSFPITAAPPPDAGVIAAPPQITAPGIPPPAPIASEATSGVQPIATTEKKTDWTEHKAP
DGRTYYYNSATKQSLWEKPDELKTPSELLLSQCPWKEYKSENGKVYYHNVTTKESRWTIP
TELEELKARIAAEEAAAAAAAVVASATNTIVPAGIQHLSPNVAIANTSQTSTPEPGGKSA
IEQAMAATLAAINIPTPPAKPDEDSNSAKGSANDSRTSTPEPKMQFKDKKEAIEAFKELL
RERDVPSNATWEQAVKLIQSDPRYPQMKKLNERKQAFNAYKTQKLKEEREQERLRLKKAK
EDLEQFLLENDRMTSTTKYYKCEEMFGNLEVWRAVGDSDRRDIYEDVIFNLAKREKEEAK
QLKKRNTKRLAQVLDTMTDVTYRTTWQEAQALLLQHAAFAEDADLLEMDKEDALLIFENH
IRQLEKDEEEEKEHEKKRRKRQERKNRDAFISLLDELHEQGKLTSMSLWVELYPMLSADL
RFSAMLGQSGSTPLDLFKFYVEDLKSRFHDEKKIIREILKDKNFEVQVNTTFEEFATVVC
EDRKSATLDAGNVKLTYNLLLEKAEAREKERVKEETRKFKKLETGFKNLLKTLNVDYQMT
WDDVRSKIEEEPDFKAITLESERVRIFKEYQHELEESCSHHHIRSKKKKTKKVKRKSRSR
SHSESEGSDKGLKKKRHKSRSPSVPSKSDSSESDTRKSKKKKSKKKRGRSHSRSHSRLPS
SEESPERKRKEEKHRRPSAHSEGSVTENAEHHELSEDELEKQRAQLLRELQMQQEDN
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaaatgatggtatacctccacccgctgcggtaccagggtttccaccagcgact
ccaaatattgcttccacttttgtaccacctattatgcctactgcaccttttatacctcct
cctagtttaccacctggtccacccggtataatgcctccacagttttctatacctccacca
ggttttagttttccaattactgctgctcctccacctgatgctggagtcatagctgcacct
cctcaaataacggcaccaggtattcctccacctgcacctatagcaagtgaagccacatca
ggtgttcaacctattgcaacaacagaaaaaaagactgattggactgaacataaagctcct
gatggaaggacatattattataatagtgctacaaaacaatctttgtgggagaaaccagat
gagctaaaaacacctagtgaattgcttttatcacaatgcccttggaaagaatataaatca
gagaatggaaaagtatattatcataatgtgacaactaaggaatctaggtggaccattcct
acagagttagaagaattaaaagcaagaattgcagctgaagaggctgcagctgcagctgca
gcagttgttgcgagtgctacaaatactatagttcctgcaggtattcaacatttatctcca
aatgttgcaattgcgaatacatctcaaaccagtacaccagaaccaggtggaaaatctgca
attgaacaagccatggctgcaactcttgcagcaataaacattcctactccacctgcaaag
ccagatgaagatagcaattctgcaaaaggatcagcaaatgatagtcgtaccagtactcct
gaaccaaaaatgcaatttaaagataagaaggaagcaattgaagcatttaaagaattatta
agagaaagagatgttccatcaaatgctacatgggaacaggcagtaaaattaattcaaagt
gatcctagatatccacaaatgaaaaaattaaatgaacgtaaacaagcattcaatgcatat
aagacacagaaacttaaagaggaacgtgagcaagaaagattaagattaaaaaaagctaag
gaagatttggaacaatttttattagaaaatgatagaatgacaagtacaacaaagtattat
aaatgtgaagaaatgtttggtaatttggaagtgtggagggctgttggtgattcagatcgc
cgggatatttatgaggatgttatttttaatttagctaagcgtgaaaaagaagaagcaaaa
cagttaaaaaagagaaatactaaaagattagctcaagttttagatactatgactgatgtt
acatatagaactacttggcaagaagcacaagcattacttttacaacacgcagcttttgca
gaagatgcagacttattagaaatggataaagaggatgcattacttatttttgaaaatcat
atacgtcaactagaaaaggatgaagaagaagagaaagaacatgagaaaaaacgtagaaaa
agacaagaacgaaaaaacagagatgcttttataagtttgttggatgagcttcatgaacaa
ggaaaattaacatccatgtcattgtgggtagaactttacccgatgttatctgctgattta
agattttcagctatgcttggacaatctggatcaactccactagatttgtttaaattttac
gtcgaagatttgaaatctagatttcatgacgaaaagaaaattatcagagaaattctgaaa
gataaaaattttgaagtgcaagttaatactacttttgaagagtttgctacagtcgtatgt
gaggatcgaaaatctgcaacattagatgcgggtaatgtaaaattaacgtacaatttatta
cttgaaaaagctgaagcccgagagaaagaacgtgtaaaggaagaaactagaaagtttaag
aaattagaaactggctttaaaaatttactaaaaactcttaatgttgattatcaaatgacg
tgggacgatgtaagaagtaagattgaagaagaaccagatttcaaagcaataacattagaa
agcgagagagttagaattttcaaggaatatcaacacgaacttgaagaaagctgtagtcat
catcacattagaagtaaaaagaagaaaacaaaaaaggtgaaacgcaagtcacgatcgcga
tcacatagtgagtctgaaggtagcgataaaggtttgaagaaaaaaagacataaatcaaga
tcaccaagtgttcctagcaaatcggatagttccgagtctgatactagaaaatcaaaaaag
aagaagagtaaaaagaagagaggtcgtagtcattcgcgatcacattcgagacttccgtct
tctgaagaatcaccagaaagaaaacgaaaggaagaaaaacatagaagaccttctgctcat
agtgaagggtctgttactgaaaatgctgagcatcatgaactttcagaggatgagttggaa
aaacaaagggcacaactattacgtgaattacaaatgcagcaagaagacaattaa
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