Bombus terrestris (buff-tailed bumblebee): 100649188
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Entry
100649188 CDS
T04364
Name
(RefSeq) collagen alpha-1(IV) chain
KO
K06237
collagen type IV alpha
Organism
bter
Bombus terrestris (buff-tailed bumblebee)
Pathway
bter04512
ECM-receptor interaction
bter04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
bter00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100649188
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
100649188
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bter04147
]
100649188
00536 Glycosaminoglycan binding proteins [BR:
bter00536
]
100649188
Exosome [BR:
bter04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
100649188
Glycosaminoglycan binding proteins [BR:
bter00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
100649188
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
100649188
NCBI-ProteinID:
XP_003399665
UniProt:
A0A9B0BZX9
LinkDB
All DBs
Position
12:11059114..11085317
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AA seq
1941 aa
AA seq
DB search
MTRLGLRFVASAVFLAGIVGGQYNHTSWPYNPPPVVPLGRGDIGKPNSTDDDYNISPRWR
AFVTNNEDSEEDRRYLNNQGQGYQGQNYDDRYNRYPDGDEYNQRTDDSGGYQTNYGGFDQ
ESYNQGQDQTPLDPYNQEAGDPYGRSGGYEDPYGRGEAGGEQRSRDSSGDGYDRNYGSRD
DYGRGDPYGQRGYSSGQRGGYGAAGDSENYPSSYTVVPVPGYKPQRNCTGSACCVPKCFA
EKGSRGPPGLMGPQGPKGQKGFPGTEGLLGPKGEKGDPGPQGLRGPKGDRGKMGIPGFSG
ISGVPGVQGPPGAPGLPGRDGCNGTDGEPGPAGRPGDTGPRGYPGPRGPKGDKGQSGFAG
RFPVGQKGEPGIDGVRGPPGQPGLQGERGFPGPKGDRGPYGPPGLQGPRGEKGNMGLAFE
GPKGDKGQKGEQGPPGSPAVGGFLHPGEEIAGPQGDRGEKGDTGERGSDGQKGEQGPIGD
HGIPGTAGMKGEKGLPGAPGIRGRDGFSGPPGPPGRKGDRGYDGLDGLPGRPGQKGEPGR
DGSMGVPGLRGPPGPPGGGKGTPGPPGPKGPQGFPGPTGPRGADGYPGDPGPRGPIGPPG
GPGLAGIPGPEGLPGEKGAKGEPGITGFPGPTGPRGFDGPPGLAGSRGLPGEKGASIMGP
KGMDGAPGRDGEKGQKGERGYAGPRGVPGDVDGIPGAPGEPGLPGEPGTPGKNGIPGFPG
SPGEKGEIGGRCIDCLPGLPGIKGDRGFDGQPGLPGPRGPAGERGFPGEPGSDGLPGPIG
PPGPPGKDGIPGAAGPQGEPGTPAVVTENMLKVEKGDKGVRGPVGRDGPPGLPGPPGEKG
PMGFEGFPGPKGIAGDRGFPGQDGIPGRPCAPGRKGEPGVSVKGEHGEPGRRGETGAKGE
PGPLGDKGEPGLCPIPDELIKGIKGDRGAPGEKGEPGPPGRDGLSGDKGLQGISGPPGPP
GSIGAPGPVGPRGLPGPRGDKGNIGPMGFPGEPGREGPRGFPGAAGLKGAKGEVGISVKG
SPGLPGPPGEKGEKGLPGPPGKEGPDGLPGLPGFSGEKGDAGIPGIGGLPGAPGEKGDTG
PMGPPGPPGVAGIPGIDGNKGEPGLPGEAGKPGLPGFPGIKGDRGEPGIDGSKGYPGRRG
LPGLQGRPGIEGAPGLKGERGEKGAAGFPGLRGMEGKPGRPGLTGPKGDIGHPGLPGLPG
TLGFQGPKGDQGLPGLPGRKGEPGLVSEKGQKGEPGMPGIRGPVGPPGRDGIDGDKGERG
LSCNCVDGLPGLKGEPGLPGRDGLPGPIGLKGDAGVRGFHGSQGDIGPMGPPGEPGTPGI
DGLPGEPGDIGPPGPPGFPGLDGDVGAPGHPGLNGGKGDRGLPGLVGEPGIRGMPGEKGD
RGQPGPTVAIKGEKGEPGMPGLRGIAGEKGDRGEEGLAGYDGEKGDRGTSGPVGNPGPPG
LPGPKGEEGPRGPTGIAGLTIKGEKGLPGLPGKHGREGVPGRPGEKGERGLPGLPGHKGD
QGPYGPIGPQGEKGDMGLMGAPGLPGQDGAPGHRGLPGQVGPKGEKGVNCIPEPGLPGQK
GEQGYPGVPGIDGLPGEKGDRGWPGLEGAPGLDGAKGEKGFPGPMGKMGAIGFVGQKGDR
GLDCLEPPMGPKGDRGYPGPTGPPGPPGEKGAPGQPGFPGLHGTKGALGLQGPPGPVGLP
GLQGPVGAPGLPGLQGPVGHPGEPGEPGLPCEAAPDYLTGILLVKHSQTDRVPICDAGHI
QLWEGYSMLSTDGNERSHSQDLGHAGSCVRKFSTMPFLFCDTGNVCNYASRSDRSYWLST
TKAIPMMPIEGTAIEEYISRCVVCEVPANVIAVHSQSLNIPDCPHGWTGLWIGYSFVMHT
GAGAQGGGQSLSSSGSCLEDFRTTPFIECNEEHCHYYSNEISFWMTTIEDRLQFQRPEKQ
TLKAGNLRSRISRCQVCIKNT
NT seq
5826 nt
NT seq
+upstream
nt +downstream
nt
atgacccggttgggattgcgattcgtcgcatccgcagtgttcctggccgggatagttggt
gggcaatataaccacacatcatggccgtacaatcctccgcctgttgttccacttggacga
ggtgatattggaaaaccaaatagtactgacgacgattataatatttcaccacgatggaga
gcttttgttacgaacaacgaagattctgaggaagataggcggtacttaaataatcaaggc
caaggctatcaaggtcagaattacgatgatcggtacaacagataccctgatggagatgaa
tataatcagagaactgatgattccggcggataccaaactaattatggaggctttgatcaa
gaatcttacaaccaaggtcaagatcaaaccccgttggatccttacaatcaagaagctggc
gatccttacggaagatctggaggttacgaagacccttacggaagaggagaggccggtgga
gaacaaaggtccagagattcttctggcgatggctacgatagaaattatggatccagagac
gattatggacgcggagatccttacggacaacgcggatactcttcagggcaacgtggtgga
tatggcgcggccggagactcggaaaattatccgagcagttacacggttgtgccagttcca
ggatacaagccacaacgaaactgtaccgggtcggcctgctgcgtgccaaaatgtttcgcg
gagaaaggttccagaggaccgccaggtctaatggggccacagggacccaaaggtcaaaaa
ggatttcctggaacagaaggtcttttgggaccaaagggagaaaaaggtgatcctggtcct
caaggactacggggtccgaaaggtgacagaggtaaaatgggtatacctggattctcgggt
ataagtggtgttcctggagtacaaggcccgcccggagctcctggtctacctggtcgtgat
ggttgcaatggaacagacggtgaacctggtcctgctggtcgtcctggagatacaggtcct
cgtggttatccaggtcctcgagggcccaagggagacaaaggtcaatcagggttcgctggt
aggttccctgtaggtcaaaagggagaaccgggtatagacggcgtcagaggacctccagga
caaccaggattacaaggagagcgtggttttcctggacctaagggtgatcgtggtccttat
ggtccgcctggtctacaaggaccaagaggagaaaagggaaacatgggtcttgcgtttgaa
ggtccgaaaggtgacaaaggtcagaagggagagcaaggacctcctggatcgcctgcagtc
ggcggctttctacatccgggagaagaaatagcaggtccacagggagatcgtggtgaaaaa
ggagacacgggtgaaagagggtcggacggtcaaaaaggagaacagggaccaattggtgat
catggtattcctggcactgcaggtatgaaaggagaaaaaggtcttccaggcgcaccaggt
attcgtggtcgggatggtttctctggacctccaggtccacctggacgcaaaggtgatcgg
ggttacgacggattagacggccttccaggtcgccctggacagaaaggagaaccaggtcga
gatggatctatgggtgttccaggcttacgaggaccacctggtccacctggaggtgggaaa
ggtacgccagggcctccaggaccaaaagggcctcaaggttttccaggacccactggacct
cgcggtgccgatggatatcccggagatccaggaccaagaggtcctattgggccaccagga
ggacctggtttagcaggtattcctggtccagagggtttgccaggagaaaagggagcaaaa
ggagaacctgggatcacaggattccctggaccaacaggtccccgtggatttgatggtccg
ccaggtttagcaggttcacgagggttgccaggagagaaaggcgcgtcgattatgggtccc
aaaggaatggacggagcgcccggtagagatggcgagaaaggacaaaaaggagaacgcggt
tacgcaggaccgcgtggagttcctggcgacgtggatggtattccaggagcgcccggagaa
cctggtttaccaggagagccgggaacaccagggaaaaacggcattccaggatttccaggt
tcacctggtgagaagggagagataggagggcgatgtatagactgtctgccgggattacca
ggaatcaaaggtgatcgtggtttcgatggacaacctggacttcctggaccacgaggcccg
gctggagaacgaggattccccggagaacctggcagcgacggattacctggaccaattggg
ccaccagggcctccgggaaaagatggtattcctggtgcagcaggtccacaaggagaacct
ggtactccagcagtggttacggaaaacatgcttaaagtagagaagggtgataaaggtgtg
agaggtccggtaggaagagatggtccacctggtcttcctggtccgcctggagaaaaaggt
ccgatgggatttgaaggtttcccaggacccaagggtattgctggagatcgtggattccct
ggtcaagatggtattcctggaagaccatgtgctcctggtcgaaaaggagaacctggtgtt
agtgtgaaaggagaacatggagaaccaggccgaagaggtgaaacaggtgcaaagggcgaa
cctggtccattaggagataaaggagaacccggtctgtgtccaattccggatgaattaatt
aaaggcattaaaggcgacagaggtgctcctggtgaaaagggagagcctggtcctcccgga
agggatgggttaagtggtgacaaaggtttacaaggtatttcgggtccacctggaccaccg
ggatcaattggtgcacctgggccagttggaccaagaggattaccaggtcctcgtggtgac
aagggtaacatagggccaatgggtttccctggggaacctggtcgtgaaggacccagaggg
ttcccaggcgccgcagggttgaaaggagcaaaaggtgaagttggtatctcggtcaagggt
agccctggattgccaggaccaccaggagagaagggagagaaaggtcttccaggaccacca
ggaaaagaaggtcctgatggtctgccgggtctgccaggattttccggagagaagggtgat
gcaggtattccaggcataggcggtttgcctggtgcgccaggagaaaagggagatactggt
ccgatgggacctccaggcccgcctggtgttgctggaattcctggtatagacggaaataaa
ggtgaaccgggattgccgggcgaggctggcaaaccaggactcccaggattcccaggtatc
aaaggtgatcgtggcgaaccgggtatcgatggatcgaaaggttacccaggaagacgtggt
ctacctggtttacaaggtagacctggtatagaaggtgcacctggtttgaaaggagaacga
ggtgaaaaaggcgctgctggtttccctggattacgtggaatggaaggaaaacctggccgc
cctggattaactggaccaaaaggagatataggtcatcctggtctacctggtcttcctgga
actcttgggttccaaggacctaaaggtgatcaaggtttaccaggattgccaggacgcaaa
ggagaaccaggtctagtttctgagaaaggacagaaaggtgaaccaggaatgccaggtatc
cgtggtcctgttggtcctcctggtagagatggtattgacggagacaaaggagaacgtgga
ttgtcatgtaattgtgtagacggattgccaggtcttaagggagaacctggtctgccaggt
cgcgatggtttaccaggacctatagggctaaaaggtgacgctggagtaagaggtttccat
ggttctcaaggagatataggaccaatgggtccaccaggcgaacccggaacacctggaatc
gacggattaccaggtgagccaggtgacatcggtccaccgggtccacctggtttccctggt
ttggatggtgatgtgggagctccaggacatcctggcctcaacggtggcaaaggagaccgt
ggtttgccaggtcttgttggggaacctggtattcgtggtatgcctggagaaaaaggtgac
cggggacaacctggaccaacagttgcgatcaaaggtgagaaaggtgaaccaggtatgcca
ggattacgaggtatagctggagaaaaaggggatcgtggtgaggaaggtctagctggttat
gatggtgaaaaaggagataggggcacatcaggtccagttggaaacccaggtccacctggt
ctccctggacctaaaggtgaagaaggtccacgtggacctacgggaattgctggattaact
atcaagggtgagaagggtctaccaggtctgccaggaaagcacggacgagaaggagtacca
ggacgaccaggagagaagggagaacgaggattacctggtttaccaggacataaaggagat
cagggaccttatggccctatcgggccacagggcgagaagggtgatatgggacttatgggt
gctcccggtttaccaggccaagatggagctccaggtcatagaggactcccgggtcaagta
ggtccaaaaggtgaaaaaggtgtaaattgtataccagaaccaggtctgccgggacaaaag
ggagaacaaggatacccaggagttcccggaattgatggactccccggtgaaaaaggtgac
agaggttggcctggtctagagggtgcaccgggtctggatggagcgaaaggtgaaaaagga
ttcccaggtccaatgggaaaaatgggtgctattgggtttgttggtcagaagggtgacagg
ggtctcgactgcctcgaaccaccgatgggaccaaaaggagaccgtggttaccctggaccg
actggcccgccaggcccgccaggagagaaaggagctccaggtcaaccaggattcccagga
ttgcatggaacgaaaggtgcactaggacttcaagggccaccaggtccagttggattacca
ggattgcaaggacctgttggtgctcctggtttgccaggtcttcaaggacccgtgggtcat
ccgggtgaaccaggagaaccaggactaccatgcgaagctgcgcctgactaccttactggt
atcttgctggtaaaacacagtcagactgacagagtgcccatttgtgatgctggacatatc
caactctgggaaggatacagtatgttatctacggatggcaatgaaagatcgcactcacaa
gatttaggtcacgccggctcgtgcgtacgaaagttctcgacgatgccgttcctcttctgc
gacaccggcaacgtttgtaactatgcaagtcgtagcgatcgttcttactggttgtcgacc
actaaagcaattcccatgatgcctattgaggggacagcgatagaggaatacatctccaga
tgcgtggtttgcgaggttccagcgaatgtgatagccgtacacagccagtcattgaatatt
ccagattgtccacacggatggaccgggctttggatcggatacagttttgtcatgcatacg
ggtgccggtgcccagggtggaggacaatccttgtccagttccggatcctgtctggaagat
ttccgtacaacgccatttatcgaatgtaacgaagaacactgccattattactcgaacgag
atcagcttttggatgacgacgatagaggacaggcttcagttccaaaggcctgagaaacag
accttgaaggcaggcaacctcaggtcccgaataagtcgctgccaagtgtgtataaagaac
acgtaa
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