KEGG   Bombus terrestris (buff-tailed bumblebee): 100649575
Entry
100649575         CDS       T04364                                 
Name
(RefSeq) THO complex subunit 3
  KO
K12880  THO complex subunit 3
Organism
bter  Bombus terrestris (buff-tailed bumblebee)
Pathway
bter03013  Nucleocytoplasmic transport
bter03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:bter00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100649575
  09122 Translation
   03013 Nucleocytoplasmic transport
    100649575
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bter03019]
    100649575
   03041 Spliceosome [BR:bter03041]
    100649575
Messenger RNA biogenesis [BR:bter03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     100649575
Spliceosome [BR:bter03041]
 Complex C
  Other components
   EJC/TREX
    100649575
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    100649575
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_IFT122_1st Beta-prop_WDR5 WD40_CDC20-Fz WD40 WD40_Prp19 Beta-prop_WDR3_1st Beta-prop_EML_2 WD40_WDHD1_1st EIF3I WDR55 ANAPC4_WD40 Beta-prop_WDR36-Utp21_2nd WD40_Gbeta Beta-prop_WDR19_1st Beta-prop_Aladin Beta-prop_WDR3_2nd Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_Vps41 Beta-prop_IFT140_1st Beta-prop_WDR36-Utp21_1st WD40_MABP1-WDR62_2nd Beta-prop_HPS5 Beta-prop_EML eIF2A RMC1_N Tricorn_2nd Beta-prop_NOL10_N WD40_MABP1-WDR62_1st Beta-prop_WDR35_TULP_N NBCH_WD40 WDR90_beta-prop_4th PAC11 DSE1_N Beta-prop_TEP1_C Beta-prop_ELP1_1st B-prop_COPA_B_2nd TRM82_WD Beta-prop_WDR75_1st Beta-prop_EIPR1 PD40 Beta-prop_Nup120_160 Beta-prop_DCAF12 PROPPIN MoaD_arch Beta-prop_NUP159_NUP214 DPPIV_N
Other DBs
NCBI-GeneID: 100649575
NCBI-ProteinID: XP_003396121
UniProt: A0A9B0F498
LinkDB
Position
6
AA seq 329 aa
MRHLLITYFFKGISNDELISYFKSHNKIREQQSHSAKVHSVGWSCDGKLLASGSFDKSVC
IFSLCPDRLKQETTFRGHGGSVDQLCWHAFYPELLSTASGDKTVRIWDTRTQKCTANIST
RGENINISWSPDGNTIAVGNKEDLVTFIDARVMKIRAEEQFNFEVNEISWNKDSDTFYLT
NGQGCVHILSYPDLELLHVIKAHPGTCICIEFDPTGRYFATGSADALVSLWDADELCCLR
TFSRLEWPVRTISFSYDGQLLAAASEDLVIDIGEVETGEKIADIPVEAATFTVAWHPKQY
LLAYACDDKDTYDRKRDAGSLKVFGFAND
NT seq 990 nt   +upstreamnt  +downstreamnt
atgcgccatctattgattacttatttttttaaaggaatatcaaatgacgagctgatcagt
tacttcaaatcacacaacaaaattagagaacaacaaagtcattctgctaaagtacatagc
gtaggatggagttgcgatgggaaactgttagcttccggatcttttgataaatctgtttgc
attttctccctttgtccggatcgtttgaaacaagaaacaactttcagaggacatggtggt
agtgtggatcaattgtgctggcatgccttttaccctgaattattatctactgcgagtgga
gacaagacagttcgtatatgggatacgaggactcaaaaatgcacagcaaacatcagtaca
aggggtgaaaatattaatatatcatggtcaccagatggtaatacaatagcagtaggaaat
aaagaagatttagtgacttttattgatgcacgggtaatgaaaattcgtgcggaagaacaa
tttaactttgaagtgaatgaaatttcatggaataaggattctgatacgttttatctaact
aatggtcaaggctgtgttcatatacttagctatccagatttagaactgttacatgtaatc
aaagcacatccaggaacatgtatttgtatagaatttgatcctactggaaggtattttgca
actggttcagcagatgcattagtttctttatgggatgcagatgaactgtgttgtttaaga
acattttcaagattagaatggccagtgagaacgatatcattttcttatgatggacaatta
ttggctgcagcatctgaggatcttgtgatagatataggtgaagttgaaactggagagaag
attgcagatataccagtagaggcagcaacctttacagtagcatggcatccaaaacaatat
ttgttagcatatgcatgtgatgacaaagatacttatgacagaaaacgtgatgctggcagt
ttgaaagtatttggatttgccaatgactaa

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