Bombus terrestris (buff-tailed bumblebee): 100649742
Help
Entry
100649742 CDS
T04364
Name
(RefSeq) THO complex subunit 1 isoform X2
KO
K12878
THO complex subunit 1
Organism
bter
Bombus terrestris (buff-tailed bumblebee)
Pathway
bter03013
Nucleocytoplasmic transport
bter03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bter00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100649742
09122 Translation
03013 Nucleocytoplasmic transport
100649742
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bter03019
]
100649742
03041 Spliceosome [BR:
bter03041
]
100649742
Messenger RNA biogenesis [BR:
bter03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
100649742
Spliceosome [BR:
bter03041
]
Complex C
Other components
EJC/TREX
100649742
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
100649742
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
efThoc1
Death
DUF8772
Motif
Other DBs
NCBI-GeneID:
100649742
NCBI-ProteinID:
XP_003398870
UniProt:
A0A9B0C0L3
LinkDB
All DBs
Position
11
Genome browser
AA seq
654 aa
AA seq
DB search
MAMFEVLRKEYSDYLQQCFKLSDIQIFQKKCVERCTNDSDRKAAIDQALRDTLLVILSEN
VSSNVPLLETYITFCIELCRKDLATASMPVMLLGDIFDSMTLDRCEQLFTFVENNVVVWK
EDLFFSACKNNLLRMCNDLLRRLSRSQQTVFCGRILLFLAKFFPFSERSGLNIVSEFNLE
NHTEFGSEKSEGDDLEQITKDDDKSDTKVPIDYNLYRKFWALQDFFRNPNQLYLKMHWKI
FSTHASSVLSAFSSFKLEEQRNYPSTCVKVESSMEGSHKETPYFAKYLTNQKLLELQLSD
SNFRRYVLLQFLILFQYLNSTVKFKAETHELKPDQVEWVKGTTEQVYALLTETPPDGPTF
AETVKNILKREEHWNAWKNEGCPPFKRPTPDSSADIEESKKPKRPRRKIGDVIRDAQAVG
KYHMGNPELTKLWNLCPNNLEACKSKERDFLPSLETYFEEAIMQLDPNAMVEDEYKKVND
GNFGWRALRLLARRSPHFFVHGNYPINKLPEYLETMIKKIAKDRPTQSDIKLETEETPPP
EANDQEFNEDVLKQESEQVEAENTDTKGRKLTKVTPDMVAKLSEILKNDWKKLATKFGYT
SEEITFFQGKPTPYEQCKNMLEIWAEEDVDASMENLAYILEGLKFTEALAVLKS
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atggccatgttcgaagttttaagaaaagaatatagtgattatttgcaacaatgttttaag
ctgtcagatatacaaatatttcaaaagaaatgtgtcgaacgatgtacaaatgatagtgat
agaaaagctgcaattgatcaagcattaagggatactcttcttgtaatattatctgaaaat
gtatcaagtaatgtgcctctacttgagacctatattacattctgcattgaattatgcaga
aaagacttagcaactgcaagtatgccagtgatgctacttggtgatatatttgattctatg
acactcgacagatgcgaacagttgtttacttttgttgagaacaatgtggttgtgtggaag
gaagatttattctttagtgcttgtaaaaacaatttgttaaggatgtgcaatgacttactt
agaaggttatcgagatcacaacaaactgtattttgtggaagaattcttttatttctggct
aagttttttcctttttctgagaggtctggtcttaatattgttagtgaatttaatttggag
aatcatacagaatttggctctgaaaaatcagagggagacgatttggaacaaataaccaag
gatgatgataaatcagacactaaagtaccaattgattataatttatatagaaaattttgg
gcactccaagattttttcagaaatcccaatcagttatacctaaaaatgcactggaagata
ttttcaacacatgcttcaagtgtactgtcagcattttcatcttttaaattggaagaacaa
cgtaattatccttcaacatgtgttaaagttgaatcttccatggagggatctcataaggaa
accccttacttcgcaaaatatttaacaaatcaaaaattgttggagctacaattatctgat
tcaaatttcagacgatatgtattgctgcaatttctcattcttttccaatatcttaatagc
actgttaaatttaaagctgaaacacatgaactaaaacctgaccaagtagaatgggtaaaa
ggaaccacagagcaagtatatgccttactgacagaaacacctcccgatggtccaacattt
gcagaaactgttaaaaatatattgaaacgcgaagagcactggaatgcttggaaaaatgaa
ggatgcccaccatttaaaagaccaactccagattctagtgccgacatagaggaatcaaaa
aagccaaagagaccaaggcgtaaaattggagatgtcattagagacgctcaagcagtagga
aaatatcatatgggaaatccagaactcacgaaattatggaacttatgtcccaataatctt
gaagcatgtaaatctaaagaaagagacttccttccatctttagagacatattttgaagaa
gctatcatgcaattagatcctaatgcaatggtagaagatgaatacaaaaaagtaaatgat
gggaattttggttggcgagcattgagattattagctagacgtagtcctcatttttttgtc
catgggaattatcctattaataaattacctgaatatctcgaaacaatgattaaaaaaatc
gctaaagatcggccaacacagtcggatataaaattagaaacagaggagactccacctcca
gaagcgaacgatcaagaatttaacgaagatgttctcaagcaagagagtgaacaagttgaa
gccgaaaatacggatacgaaaggacgaaaattaacgaaagtgacgcctgacatggtggcg
aaattatcagaaattctgaaaaacgattggaaaaagttagcaaccaagtttggctacacg
agtgaagagattacattttttcaagggaaaccaacgccgtatgagcaatgtaaaaatatg
ttggaaatttgggcggaagaagatgtagatgcttcgatggaaaatttagcatatatttta
gaaggtttaaaattcacggaagcgctagctgttttaaaatcctaa
DBGET
integrated database retrieval system
