Bombus terrestris (buff-tailed bumblebee): 100649994
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Entry
100649994 CDS
T04364
Name
(RefSeq) pre-mRNA-processing factor 39 isoform X1
KO
K13217
pre-mRNA-processing factor 39
Organism
bter
Bombus terrestris (buff-tailed bumblebee)
Brite
KEGG Orthology (KO) [BR:
bter00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bter03041
]
100649994
Spliceosome [BR:
bter03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
100649994
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
TPR_14
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
ARM_TT21_5th
TPR_6
TPR_11
PPTA
NRDE-2
HAT
Motif
Other DBs
NCBI-GeneID:
100649994
NCBI-ProteinID:
XP_003395470
UniProt:
A0A9B0BWQ9
LinkDB
All DBs
Position
5:complement(7281129..7286906)
Genome browser
AA seq
1040 aa
AA seq
DB search
MSSASGDESEITLNEPVRRTRSSRARKTTVVAKKSPVKKLLARATRSPKKVQEIEEVEEE
VPVLQEEVVMESIPENGVQRFGDIIIEQHNEEDSSMLHLELEDSSDTTIHEINMNQSVQI
EVQENVPDLETSASQIDHSNTVSDCMIIEESSMDKVDMLNEREQMDMEGQDISNDETNQR
VLIDFQEVMNDDGETITQVTEILETEEIESETVINEGTGIEVMEVDSQQETSESIENITE
KTVPDYDMTGMVEMTETTEGDMECLPENAIKKTEPDTEAVSEDELPTEATAKEPETEAVS
DEELPAAAPADLGETESVSEDELPLDSEKKKKSGTKIMSKTLEKKNKIEGTNKRKLNAEG
EYDPSSPTSENNDETPAKKVALSTEADPGDTKQETKPASPKKKTLPELEKYWKAVNEDPS
DFTGWTYLLQYVDQENDAEAAREAYTKFLERYPYCYGYWRKFADYEKKKGNPENVQRVFD
QGLKAISLSVDLWLHYINHCKTVYEKDEEKLREQYERAIEACGLEFRSDRLWESYIKWEL
EGKRLSRVTALYDRLLCTPTLGYISHFDAFQEFVSSNLPNRILNVDDFLALRAEVKALLK
SDDSTSTSAADDAPPGEEPPPHELPPTDEETRAIREKIISSRRKMHKANINAVAARWSYE
EGIKRPYFHVKPLERCQLKNWKEYLDFEIEQKDQNRIIILFERCLIACALYDEFWMRFVR
YLESLKGDNVEKIRDVYTRACMVHHPKKPNLHLQWATFEEGQGNFEKAANILENIDNVIP
NMLQVAYRRINLERRRGDLDKACTLYENYISNSKNRTIANNIVVKYARFLCKVKSDVDKA
IKVLLKATEKDKDNPRLYLQLIDLGMQRTPVDTQEIVGYMDMFIEREHADLEQRVLFAQR
KVEFLEDFSPDIRQVLKAHEQFQKCIKQAKERKKTKNDDTKTDTSPPKKVKTGDQSNVPP
PPSVSSQSSYQYSSGPSGPYQSQQQFQSGQYGGQGGYQQGYQQYPPPSDPNYANYQNWQY
GQGGPQAYGPYNQWGSYNYY
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtccgcaagtggtgatgaaagtgagatcactttaaatgaacccgtacgacgtaca
agatctagtcgtgcacgtaaaactaccgtggtagcaaaaaaatctcctgtaaagaaactt
ctagcaagagctacacgttctccgaaaaaagtgcaagagatcgaagaagtggaggaggag
gtgcctgtgttacaagaagaagttgtaatggaaagcattccagagaatggagtgcaaaga
tttggtgacattatcattgaacaacataatgaagaagattcttctatgttacatttggaa
ttggaagattctagtgatactactattcacgaaattaatatgaatcagagtgtacaaata
gaagttcaagaaaatgtacctgatttggaaacatctgcatctcaaattgatcattctaat
acagtatcggattgtatgatcatagaagaaagtagtatggataaagttgatatgttgaat
gaacgcgaacaaatggatatggaaggacaagatattagtaatgatgaaacaaatcaacgt
gtattaatagatttccaagaagttatgaatgatgatggggaaacaataacacaagtaaca
gaaatcttagaaacagaggaaattgaatctgaaactgttataaatgaaggtactggaatt
gaagttatggaggtagatagtcaacaagaaacatcagaaagtatagaaaatattacggaa
aaaactgtgcctgattatgatatgacaggaatggtggaaatgacagaaacaacagagggt
gatatggaatgtttacctgagaatgctattaaaaaaacagaacccgatacagaagctgta
tctgaggacgaattgcctactgaagctacagcaaaggaacctgaaacagaagcagtatct
gatgaagaattgccagcagcagctcctgcagatttaggagaaactgaatcagtttctgaa
gatgaattgccattagacagtgaaaagaagaagaaaagtggaacaaagataatgagtaaa
accctggaaaagaagaataaaatagaaggaacaaataaacgtaagttaaatgcagaagga
gagtacgatcctagttcaccaacgtctgaaaataatgatgaaacaccagcaaagaaagtt
gcgctttcaacagaagcagatccaggggacactaaacaagaaactaaaccagcatcacca
aagaaaaagaccttaccggaattagaaaaatactggaaagccgttaatgaagatccatca
gatttcacgggatggacatatcttcttcagtacgtcgatcaagagaatgatgctgaagct
gcacgtgaggcttatacgaaatttttggagcgttatccatattgctacggttactggaga
aagtttgcagattacgagaagaagaaaggcaaccccgaaaatgtccaaagggtattcgac
caaggtttgaaagccatttcgctcagtgtcgacctttggcttcattacatcaatcactgc
aaaaccgtctatgaaaaagatgaagaaaaactacgagaacaatatgaaagggctattgag
gcatgtggtcttgaattcagatctgatcgtctttgggaaagctatataaagtgggaatta
gagggcaaacgtctaagcagagtaacagcattatatgatcgcctattatgtactccaaca
cttggttatatttctcatttcgatgcatttcaagagttcgtctcttcaaacttacccaat
cgtattttaaatgttgacgattttcttgcattgcgtgctgaagtgaaagcacttttgaag
tcggatgatagtacttctacttcagcagcagatgatgcaccacctggagaagaaccgccg
ccacatgaacttccaccaactgatgaggagacccgtgctattagagaaaaaatcattagt
agtagacgtaaaatgcacaaagctaatattaatgcagttgctgcaagatggtcatatgag
gaaggtattaagaggccatatttccacgttaaacctttagaacgatgtcaattaaaaaat
tggaaagaatatttagactttgaaattgaacaaaaagatcagaatcggataatcatctta
tttgaaagatgtttaatagcgtgtgctttatatgatgaattctggatgagattcgttcgt
tatctggaatctttgaaaggtgataatgtggaaaaaattagagatgtatatacgagagct
tgtatggtgcatcacccgaagaaaccaaatttacatctacaatgggcaacatttgaagag
ggtcagggcaattttgagaaggcagcaaatatattggaaaatattgataatgtaatacca
aacatgttacaagtggcatatcgaagaataaatttggagcgtagaagaggagatttagat
aaagcttgtacattgtatgaaaattatattagcaatagtaagaatagaaccattgcgaat
aatattgtagtaaaatatgcacgatttttgtgtaaagtaaagagtgatgtggataaagca
atcaaagtattattgaaagcaacagaaaaagataaagataatccaaggctttatttacaa
ttgattgatttgggaatgcaaaggactcctgttgatactcaagaaattgtaggatatatg
gatatgtttatagaacgagaacacgcggatcttgaacaaagagtactttttgcacaacgt
aaagtagaatttctcgaagattttagtccggatattcgacaagtgttaaaagcgcatgag
caattccaaaaatgtattaagcaagcaaaggaacggaaaaagacgaagaatgacgacaca
aaaacagatacttctcctccaaagaaagttaaaactggagatcaatctaatgtaccacct
ccgccttctgtaagttcgcagtcatcataccaatacagcagtggcccaagtggaccatat
cagtcacaacaacaatttcaaagtggtcaatatggtggtcaaggcggatatcaacagggt
tatcaacagtatccacctccgtccgatcccaactatgccaattatcagaattggcaatat
ggacaaggagggccacaggcatatggaccgtacaatcaatggggatcttacaattactat
tag
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integrated database retrieval system
