Bombus terrestris (buff-tailed bumblebee): 100650114
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Entry
100650114 CDS
T04364
Name
(RefSeq) vacuolar protein sorting-associated protein 35 isoform X1
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
bter
Bombus terrestris (buff-tailed bumblebee)
Pathway
bter04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
bter00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
100650114
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bter04131
]
100650114
Membrane trafficking [BR:
bter04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
100650114
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
ApoLp-III
DUF3896
Motif
Other DBs
NCBI-GeneID:
100650114
NCBI-ProteinID:
XP_048261006
UniProt:
A0A9C6SHD6
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Position
4:15242571..15246851
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AA seq
812 aa
AA seq
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MVSLFFSQPMTPAITGVEEQEKLLEDAIGVVKVQAFQMKHCLDKSKLMDALKHAATMLGE
LRTSLLSPKSYYELYMAITDELRHLELYLLDEFQKGRKVTDLYELVQYVGNIVPRLYLLI
TVGLVYIKTTPGLKRDLLRDLVEMCRGVQHPLRGLFLRNYLLQCTRNILPDVAEEDDEDG
SVRDSIDFVLMNFAEMNKLWVRMQHQGHTRDRERREREREELRILVGTNLVRLSQLESVT
LEKYKKRVLPGILEQVVSCRDAIAQEYLMECIIQVFPDEFHLQTLNAFLKSCAELQNGVN
VKNIIISLIDRLAAFSQRSDGVGGPGSPNQVPGIPQDVKLFDVFSDQIAIIIQTRQDMPP
EDIVSLQVALINLAHKCYPDRVNYVDKVLLTTVQIFQKQNVDKLEYNSAVSRELVRLMKI
PIDNYKNILTVLKLEHFAPLLDYFDYEGRKLLAIYIITNILENETLIPTQEQVDAVLSMV
SPLVQDQPDQPNIEEDPEDFAEEQGLLGRLIHHFKSETADQQYMILSAARKHFSAGGNKR
IKYTLPPIVFQAYQLAFTYKGLKDQDEMWQKKCQKIFQFCHATITALMKAELAELPLRLF
LQGAIAIGEIRFDNFEMVAYEFMSQAFSIYEDEISDSKAQLAAITLIIATFEQMSCFCEE
NAEPIRNQCVLYASKLLRKPDQCRGIAICSHIFWSGKSLATGGKEMQNKSRVLECLRKGI
KIANQCMDTSVQVQLYVELLNHYIYFYEKDNTTFTVDIVNQVIAKIKEELPNLEVSEETE
QIQKHLANTLEHLRNRMESPETDSLSYQGLVL
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atggtatctttatttttctcgcagccaatgacacctgctataacgggagtagaagagcaa
gaaaaactacttgaagatgcaattggtgtggttaaagtacaagcttttcaaatgaaacac
tgtttggacaaatccaaattgatggatgcattaaaacatgcagctacaatgttaggagaa
cttcgaacatctcttttaagtccaaaaagttactacgaattatatatggctattactgat
gaactaagacatttagaactttatttgttagatgaatttcagaaagggagaaaagttaca
gatttatatgaattagtgcaatatgttggaaatattgtacctagactgtatctgcttatc
actgttggattagtatatatcaaaacaacacctggattaaaaagagacttattaagagat
ttggtagaaatgtgtagaggagttcaacatcctttaagggggctctttttaaggaattac
ctactacagtgcactcgtaacattttaccagatgttgctgaagaagatgatgaagatgga
agtgtccgtgatagtatagactttgtcttgatgaattttgctgaaatgaataaattatgg
gtacgcatgcaacatcaaggtcatactagagatagagaaagaagggaaagagaaagagaa
gaacttagaatattagtgggaactaatcttgtacgacttagccaattggaatcagttact
ttagagaaatacaaaaagcgtgttttaccaggcattttagaacaagtagtcagttgcaga
gatgcaattgctcaagaatatcttatggaatgcataatacaagtttttcctgatgaattt
catctacaaactttaaatgcatttttaaaatcttgcgctgagttgcagaatggtgtaaat
gtaaaaaatataattatttcgttaatagaccgtcttgcagcatttagtcaaagatcagat
ggtgtgggaggaccaggaagtcctaatcaagtaccgggaattccacaggatgtaaaactt
tttgatgtttttagtgatcagatagctataattatacagactagacaagatatgccccca
gaggacatagtttctcttcaagtagccctcattaatttagcacataagtgttatcctgat
agagtaaactatgtggataaagttttgttaacaactgttcaaatattccaaaagcagaat
gtagataagcttgagtataatagtgctgtatcaagagaattagtgagactaatgaaaatt
ccaatagataactataaaaacatcttaactgttttgaagcttgagcattttgctccatta
ctagattactttgactacgaaggcagaaagttattagctatttatataataacaaatatt
ttagaaaatgagactttaataccaactcaagaacaagtagatgcagttctttctatggta
tctccattggtacaagaccaaccagatcaacccaacatagaagaagatcctgaagacttt
gcagaagaacagggtcttcttggtagattaatacatcattttaagtctgagacagctgat
caacaatatatgatattaagtgcagccagaaaacattttagtgctggtggaaataagaga
ataaaatatactctaccaccaattgtatttcaagcttaccaacttgctttcacatataag
ggattaaaggatcaagatgaaatgtggcagaaaaaatgtcaaaaaatctttcaattctgt
catgcaactattacagctttaatgaaggcagaactggccgaactgccattgagattattt
cttcagggtgcaatagcaataggagaaattcgtttcgataattttgagatggttgcttat
gaatttatgagtcaagcattttcaatatatgaagatgaaataagtgattctaaggcgcag
ttagcagctattacgttgatcattgctacatttgaacaaatgagttgtttttgtgaagaa
aatgcagaaccaatacgcaatcagtgtgttttatatgctagcaaattattaagaaaacca
gatcaatgtagaggaattgctatttgctctcatatattctggtctggaaaatcattagca
actggtggaaaagagatgcaaaataaatctagggtattagaatgtttaagaaaaggtatc
aaaattgcaaatcagtgcatggatacttcagttcaagtacaattgtatgtagaactatta
aatcattacatttatttctatgagaaagataatactacgttcactgttgatattgtaaat
caagtgatcgcaaagattaaagaagaactccccaacctagaagttagtgaagaaacagaa
caaattcaaaaacatttagctaatacattagaacatttaaggaatagaatggaatctcca
gaaacggatagcctatcatatcaaggacttgtcctttaa
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