| Entry |
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| Name |
(RefSeq) protein CASC3 isoform X1
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| KO |
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| Organism |
bter Bombus terrestris (buff-tailed bumblebee)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:bter00001]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100650747
03015 mRNA surveillance pathway
100650747
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:bter03019]
100650747
Messenger RNA biogenesis [BR:bter03019]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
100650747
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
4:complement(492877..498586)
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| AA seq |
801 aa
MSDTRRRRKSDQSCGSDDLSDSCEELNATKETQSSEQTDGHQDSECDIYPSDSDAESQDG
ALRESGDGQEEEKPQKKLDDDEDRRNPQYIPKRGTFYEHDDRTIDEVTDSAVESQNERET
KEKKVWKDKEDRWDHDRYNDEEQAPKSHEELIAVYGYDIRNEEGPPRARRRRRYGRGPNK
YTRNWEDEDAYGKPGSNVSNKNRKFNRSGEDFPALGTNKNASTHVEEPVISSAWYSSKNK
SQNKVQNFPPLQAQGDSLKSKSSNTSNTHTNENKAPNEPTNPAWKKDTKHSSHIQSSNGN
NGAGGDADKLINTKISSKDNNKRNVQESVSLAASRTRGRGFRTNANNNMVTNRTVEIKPK
GRGIGLTITENKRNNIQNDDEQQITHDMKHVSVTDGTQYHQSGRHNKSFYGQSSNQQRSG
TVPPRMQQQQPQQQQQQQQQSIQQQDGSANRPKRYSSLRQRSTVSDNPGPQNYPPQHGQH
GQHNQHNQHNQHGQHGQHGYFPPQAGNSRGVLDSQGYPQGHFEQTTPVATATAPMTGQPV
IPIPPNGQPASYAPPFLVPPPQFISPQTAPPSIINYVPGPNGPAFQPNFQGYQGYSPPVQ
PQRPPPPQELFQPQGCTYYSPAQQQQQQQQSAPMRRPKAAIPILPPPENQHQTSRGRGKP
TQPQQTNQLGNTQQTEQEVKINSIESDQKTVPEQFDNIEIEQTETQETEKIDGSSAIANL
VVENTEKDIKILDIETPVNLGDTTTDQLDDISANNSSKVITKEENIISLKAIAPVIEKAE
NDSKKVENTTTESTVVEEAAA |
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| NT seq |
2406 nt +upstreamnt +downstreamnt
atgtcggatacaagacgacgacgaaaatctgatcagtcttgtggttctgatgacctctcg
gactcttgtgaagaattaaacgcaacgaaagaaacccagagcagcgagcaaactgatggt
catcaggattcagaatgtgatatctatccttctgattctgatgctgaatctcaagatggt
gcattgcgagaaagtggggatgggcaagaagaagaaaaaccgcagaaaaagctggatgat
gacgaagacagacgtaatccacaatatatccctaaaaggggaacattttatgaacatgat
gatagaaccattgatgaagtaacagatagtgcagttgagtcacaaaatgagagagaaacc
aaagaaaaaaaagtatggaaagataaagaagatagatgggatcatgatcgatataatgat
gaagaacaggcaccaaagagccatgaagaattaatagctgtttatggctatgatataaga
aatgaagaaggtccacctagagctagaagaagaagaagatatggccgtggtcctaacaaa
tatacgcgtaattgggaagatgaagatgcatatggaaagcctggaagcaatgtttcaaat
aagaatagaaagtttaatagaagtggagaagattttcctgctctaggaacaaataagaat
gcttccacacatgtagaagaaccagtaatttcatcagcttggtacagtagtaagaataag
tcacagaataaagtacaaaattttccacctttacaagctcaaggtgatagtctgaaatca
aaatctagcaatacgtctaatactcatacgaatgaaaataaggctcctaatgaacctaca
aatccagcctggaaaaaggatactaaacattcgtctcacattcagagcagtaatggaaat
aatggagctggtggtgatgcagataaattgattaatacaaagatatcttcaaaagataat
aacaagaggaacgttcaagagtctgtaagcttggcagcgagtagaactcgtggacgagga
ttcagaacaaatgctaataacaatatggtcaccaatagaacagttgaaatcaaaccaaag
ggacgcggaattggattgactatcactgagaataagagaaataatatacagaatgacgac
gagcaacaaattactcatgacatgaaacacgttagcgttactgatggtactcaatatcat
caaagtggaagacataataaaagcttctatggacagtcctcaaatcagcagagatcagga
acagtacctccaagaatgcagcaacaacaaccacagcagcaacaacaacaacaacaacaa
tcgattcagcagcaagatggttctgctaataggccaaaacgttattcaagtttgcgacag
cgatctactgtttcggataatccaggaccacaaaattatccaccacaacatgggcaacat
ggacaacacaatcaacacaatcaacacaatcaacatggtcagcatggtcaacatggatat
tttcctcctcaagctggaaattcaagaggtgttttagattcacaaggatatccacaagga
cattttgagcaaaccacacctgttgctactgcaactgcacctatgactggtcagcctgta
attcctataccacctaatggtcaacctgccagttatgctccaccatttttagtaccgcca
cctcagtttatttctccacaaactgctccacctagtataattaattacgttcctggtcca
aatggaccagcatttcaaccaaatttccaaggttatcaaggatatagtccaccagtacag
ccacaacgtcctccacctccacaagaattgtttcaaccacaaggttgtacttactatagt
ccagcgcagcagcagcaacaacaacaacaatcagctccaatgagacgaccaaaagcagct
attccaattcttccaccaccagagaatcaacatcagaccagtcgaggaagaggcaaaccc
acacagccacaacaaacaaatcaacttggtaatacacaacagactgaacaagaagttaaa
attaactcaatagaaagtgatcagaagactgtgccagaacagttcgataatatagaaatt
gaacaaacagaaactcaagaaacagagaaaatcgacggttcgagtgcaatagcgaatctt
gtggttgagaataccgaaaaagatattaaaattcttgatatcgaaacaccagtgaatttg
ggagatactactaccgatcaattagacgatataagtgctaataattcatcaaaagtcatt
acgaaggaggaaaatattatttcgcttaaagctatagcaccagtcattgaaaaggctgaa
aatgattcaaagaaagtagaaaatacaacgactgaaagtacagttgttgaagaagcagca
gcttga |
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