Bombus terrestris (buff-tailed bumblebee): 100651252
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Entry
100651252 CDS
T04364
Name
(RefSeq) ATP-dependent RNA helicase WM6
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
bter
Bombus terrestris (buff-tailed bumblebee)
Pathway
bter03013
Nucleocytoplasmic transport
bter03015
mRNA surveillance pathway
bter03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bter00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100651252
09122 Translation
03013 Nucleocytoplasmic transport
100651252
03015 mRNA surveillance pathway
100651252
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bter03019
]
100651252
03041 Spliceosome [BR:
bter03041
]
100651252
Enzymes [BR:
bter01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100651252
Messenger RNA biogenesis [BR:
bter03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
100651252
Spliceosome [BR:
bter03041
]
Complex C
Other components
EJC/TREX
100651252
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
100651252
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
100651252
NCBI-ProteinID:
XP_003397750
UniProt:
A0A9B0BY58
LinkDB
All DBs
Position
9:complement(12780436..12785860)
Genome browser
AA seq
424 aa
AA seq
DB search
MADNDDLLDYEDEEQTEQLVDGSRDTPAKKEVKGTYVSIHSSGFRDFLLKPEILRAIIDC
GFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLELTENQVYVLVMCHTR
ELAFQISKEYERFSKYMPHVKVGVFFGGLPIQKDEEVLKNVCPHIVVGTPGRILALVRNK
KLNLKHLKHFILDECDKMLELLDMRRDVQEIFRSTPHGKQVMMFSATLSKEIRPVCKKFM
QDPMEVYVDDEAKLTLHGLQQHYVKLKENEKNKKLFELLDVLEFNQVVIFVKSVQRCMAL
AQLLTEQNFPAIGIHRGMTQEERLSRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNYD
MPEDSDTYLHRVARAGRFGTKGLAITLVSDESDAKILNDVQERFDVNITELPDEIDLASY
IEGR
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggcggataatgatgacctcttggattacgaagatgaagaacagactgaacaattagtt
gatggaagtagggatacacctgctaaaaaagaagtgaagggcacatatgtatctattcac
agtagtggatttagggattttcttcttaaaccagaaatattacgtgcaattattgattgt
ggttttgaacatccatctgaagtacaacatgaatgcattccccaagcagtgcttggtatg
gatatattatgtcaagcaaaatctggcatgggaaaaacagctgtatttgtgctagctaca
ttacagcaattagaattaacagagaaccaggtctatgtccttgtcatgtgtcatacgcga
gaacttgctttccaaattagcaaagaatatgaacgatttagcaaatatatgcctcacgtg
aaggtcggtgtattttttggtggtttaccaattcaaaaagatgaagaagtcctaaagaac
gtatgtcctcatattgtcgttggtacaccaggtcgtatccttgctcttgttcgaaataaa
aagttaaatctgaaacacttgaagcactttatactcgatgaatgtgataaaatgctcgag
ctattagacatgcgcagggacgtacaggaaatatttagaagcactccacacggcaaacaa
gtcatgatgttcagcgctacattgtccaaggagatacgtcctgtctgcaaaaagttcatg
caagatcccatggaagtctatgtggatgatgaagcgaaactcacgttgcacggtctacaa
caacattatgtgaaacttaaagagaatgaaaagaacaagaagctatttgaattacttgat
gtacttgaatttaatcaggtcgttatctttgtaaaatctgtacaaaggtgtatggctttg
gcacaacttctaacagaacaaaattttcctgcgattggtatacacaggggtatgactcag
gaagaacggctatcaaggtaccaacaatttaaagatttccaaaagcgaattttggtagct
acaaatttatttggacgtggtatggatattgagcgtgtaaacatagtgtttaattacgat
atgccagaagattcggacacatatctacatcgagtagccagagctggtcgtttcggtacc
aagggtcttgctattacattagtcagtgatgaaagtgatgctaagatactgaacgatgtt
caagaacggtttgatgttaatattacagagttaccagatgagatagatctagcttcatac
attgaaggacgataa
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