Bombus terrestris (buff-tailed bumblebee): 100651490
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Entry
100651490 CDS
T04364
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
bter
Bombus terrestris (buff-tailed bumblebee)
Pathway
bter03018
RNA degradation
bter03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bter00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100651490
09123 Folding, sorting and degradation
03018 RNA degradation
100651490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bter03019
]
100651490
03041 Spliceosome [BR:
bter03041
]
100651490
Messenger RNA biogenesis [BR:
bter03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
100651490
mRNA degradation factors
5'-3' decay
Lsm complex
100651490
Spliceosome [BR:
bter03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
100651490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
100651490
NCBI-ProteinID:
XP_020720256
UniProt:
A0A9B7CXN8
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All DBs
Position
9:12779115..12780286
Genome browser
AA seq
139 aa
AA seq
DB search
MLPLSLLRTAQNHPMLVELKNGETYNGHLVSCDSWMNINLREVICTSRDGDKFWRMPECY
IRGSTIKYLRIPDEVIDMVKEDVQMKSRGRGEMKGRGQSQRGRGSGRGTFGRGGRGPAAL
GRGGGNQGGNKSQNKARTK
NT seq
420 nt
NT seq
+upstream
nt +downstream
nt
atgttacctttgtcgttattaagaactgctcaaaaccatcctatgctagtcgaacttaag
aatggagaaacgtataatggacatttagttagttgtgatagctggatgaatattaatctc
agagaggttatatgtacatccagggatggcgataaattttggagaatgcctgaatgctat
attcgaggtagtacaattaagtatttacgaattcctgatgaagtcatagatatggtaaaa
gaagatgtacaaatgaaatcgaggggacgtggagaaatgaaaggaagaggacaaagtcaa
cgaggtcgtggtagtggaagaggaacttttggtcgtggtggtagaggccctgctgctctt
ggtcgtggtggaggtaatcaaggaggaaacaaatctcaaaataaagcaagaaccaaatga
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