Bombus terrestris (buff-tailed bumblebee): 100652090
Help
Entry
100652090 CDS
T04364
Name
(RefSeq) collagen alpha-5(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
bter
Bombus terrestris (buff-tailed bumblebee)
Pathway
bter04382
Cornified envelope formation
bter04512
ECM-receptor interaction
bter04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
bter00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100652090
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
100652090
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
100652090
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bter04147
]
100652090
00536 Glycosaminoglycan binding proteins [BR:
bter00536
]
100652090
Exosome [BR:
bter04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
100652090
Glycosaminoglycan binding proteins [BR:
bter00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
100652090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Chitin_bind_4
LMBR1
Motif
Other DBs
NCBI-GeneID:
100652090
NCBI-ProteinID:
XP_048266653
UniProt:
A0A9C6SD47
LinkDB
All DBs
Position
12:6735483..6761613
Genome browser
AA seq
2677 aa
AA seq
DB search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NT seq
8034 nt
NT seq
+upstream
nt +downstream
nt
atgctcggccgtgtgcgcgccgctttcttcagcctggtgattgccacatctctgttgcaa
tacacacagcaacaaggaagtaggcagagtagagaagtaatattgaacatcagtgacgag
cagaaaattcaatacctaaatcaagatttctattcgaatgcatataattatggctatgaa
gtaagtcccaacggacaatttcatcacgaggtacgcggtccagacgacatcacgtatgga
tgctatggatatattgatccatttggaaagctgaaaacaacgttctacatcagcgatggt
tggggatatcgagttgttcaaccaggaaactcggttgaattgttccttcatgaacacgaa
catcaccacgaagatgacacaggacaacatcatcaggaacatgatgatcatcacgatcat
catggggtgattacagaatgggcaaatttgtatttcccagaaatatgtagacaattcgat
ggaacaggttccggatcaaacgtcataccaataccaggatatcctggaatgccggaaaaa
ccatcacaaccaggatatccaggcaaaccaggaactcctggtatacctggcacaccagga
acgccaggacaacccggctatcctggaacaccaccacaacccggataccccggcaaaccc
ggaacacctggcacccctggcacacctggaacgccaggacaacccggctatcctggaaca
ccaccacaacccggatacccaggcaaacccggaacacctggcacaccaggcacacctgga
acgccaggacaacccggctatcctggaacaccaccacaacctggatacccaggcaaaccc
ggaacacccggaacacccggaacaccaggaacgccaggacaacccggctatcctggaaca
ccaccacaacctggatacccaggaacgcctggaacaccaggtacaccgggaacaccggga
tatcctggaacaccaccacaacccggatatccaggcaaacccggaacacctggcactcct
ggcacacctggaacgccaggacaacctggctatcctggaacaccaccccaacctggatac
ccaggcaaacccggaacacctggcacccctggcacacctggaacgccaggacaacccggc
tatcctggaacaccaccacaacccggatacccaggcaaacccggaacacccggtacaccc
ggaacaccaggaacgccaggacaacccggctatcctggaacaccaccacaacctggatac
ccaggcaaacccggaacacctggcacaccaggcacacctggaacgccaggacaacccggc
tatcctggaacaccaccacaacccggatacccaggcaaacccggaacacccggtacaccc
ggatcaccaggaacgccaggacaacccggctatcctggaacaccaccacaacctggatac
ccaggcaaacccggaacacctggcacaccaggcacacctggaacgccaggacaacccggc
tatcctggaacaccaccacaacctggatacccaggaacgcctggaacaccaggtacaccg
ggaacaccgggatatcctggaacaccaccacaacccggatacccaggcaaacccggaaca
ccaggcattcctggcacacctggaacgccaggacaacccggctatcctggaacaccaccc
aaacctggatacccaggcaaacccggaacacctggcacccctggcacccctggcacacct
ggaacgccaggacaacccggctatcctggaacacctggtacacccggaacaccaggacaa
cccggttaccccggaaaaccgtcccaacctggaagtcccggaacacctggcacccctggc
acacctggaacgccaggacaacctggctatcctggaacaccaccccaacctggataccca
ggcaaacccggaacacctggcacccctggcacacctggaacgccaggacaacccggctat
cctggaacaccaccacaacctggatacccaggcaaacccggaacacctggcacaccaggc
acacctggaacgccagcacaacccggctatccgggaacaccaccccaacctggataccca
ggcaaacccggaacacctggcacccctgggacacctggaacgccaggacaacccggctat
cctggaacaccaccacaacccggatacccaggcaaacccggaacacccggtacacccgga
acaccaggaacgccaggacaacccggccatcctggaacaccaccacaacctggataccca
ggaacgcctggaacaccaggtacaccgggaacaccgggatatcctggaacaccaccacaa
cccggatacccaggcaaacccggaacaccaggcattcctggcacacctggaacgccagga
caacctggctatcctggaacaccaccccaacctggatacccaggcaaacccggaacacct
ggcacaccaggcacacctggaacgccaggaaaacccggctatcctggaacaccaccacaa
cccggatacccaggcaaacccggaacacctggcacaccaggcacacctggaacgccagga
aaacccggctatcctggaacacctccacaacccggatacccaggcaaacccggaacacct
ggtacacccggaacaccaggaacgccaggacaacccggctatcctggaacaccaccacaa
cctggatacccaggcacgcctggaataccaggtacaccgggaacaccgggatatcctgga
acaccaccccaacctggatatccaggcaaacccggtacacctggcactcctggcacacct
ggaacgccaggacaacccggctatcctggaaaaccaccacaacccggatacccaggcaaa
cccggaacacctggcacaccaggcacacctggaacgccaggacaacccggctatcctgga
acacggccacaacctggatatccaggcacgcctggaataccaggtacaccgggaacaccg
ggatatcctggaacaccaccccaacctggatatccaggcaaacccggaacacctggcact
cctggcagccctggcacacctggaacaccaggacaacctggctatcctggaaaaccacct
caacctggatacccaggcaagcctggaacacctggaactcctggcacacccggaacacct
ggacaacccggatatcctggaacgccacctcaacctggatatccaggcacacctggaata
cctggcactcctggcacacccggaacaccacctcagccgggatatccaggcaaacccgga
atacctggcacccctggcactcctggcacacccggaactccaggacaacccggctaccct
ggaaaaccgccccaacctggatatccgggcacacctggcacgcctggtacacccggatca
ccaggacaacctggctatcctgaaaaaccacctcagccgggatacccaggcaaacctgga
acacctggcacccctggtacgcccggaacgccaggaaaacccggctaccccggaaaaccg
tcgcagcctggatacccaggcaaacccggaacacctggcactccaggcacacctggaacg
ccaggacaacccggctaccctggaacaccgccgcaacctggatacccgggcactcctgga
acgcctggacaacctggttatcctggaacgccgcctcaacctggatatcctggcacacct
ggaacacctggcactcctggcacacccggaacaccacctcagcctggatatccaggcaag
cctggcacacctggaacgcctggtacacccggaacgccagggcaacctggctaccctgga
acaccgccgcaacctggatacccgggcacacctggaacgcctggcactcctggcacaccc
ggaacaccacctcagcctggatatccaggcaagcctggcacacctggaacgcctggtaca
cccggaacgccagggcaacctggctaccctggaacaccgccgcaacctggatacccgggc
actcctggaacgcctggacaacctggttatcctggaacgccacctcaacctggatatcct
ggcacacctggaacacctggcactcctggcacacccggaacaccacctcagcctggatat
ccaggcaagcctggcacacctggaacgcctggtactcccggaacgccagggcaacctggc
taccctggaacaccgccgcaacctggatacccgggcacacctggaacgcctggcactcct
ggcacacccggaacaccacctcagcctggatacccaggcaagcctggcacacctggaacg
cctggtacacccggaacgccagggcaacctggctaccctggaacaccgccgcaatctgga
tacccgggcactcctggaacgcctggacaacctggttatcctggaacgccacctcaacct
ggatatcctggcacacctggaacacctggcactcctggcacacccggaacaccacctcag
cctggatatccaggcaagcctggcacacctggaacgcctggtacacccggaacgcctggg
caacctggctaccctggaacaccgccgcaacctggatacccgggcactcctggaacgcct
ggacaacctggttatcctggaacgccacctcaacctggatacccgggcacacctggaacg
cctggcactcctggcacacccggaacaccacctcagcctggatacccaggcaagcctggc
acacctggaacgcctggtacacccggaacgccagggcaacctggctaccctggaacaccg
ccgcaacctggatacccgggcactcctggaacgcctggacaacctggttatcctggaacg
ccacctcaacctggatatcctggcacacctggaacacctggcactcctggcacacccgga
acaccacctcagcctggatatccaggcaagcctggcacacctggaacgcctggtacaccc
ggaacgccagggcaacctggctaccctggagcaccgccgcaacctggatacccgggcaca
cctggaacgcctggcactcctggcacacccggaacaccacctcagcctggatacccaggc
aagcctggcacacccggaacgcctgggcaacctggataccctggaacaccatcgcaacct
ggatacccgggcatacctggaacgcctggatacccaggcaagcctggcacacctggcact
cctggcacacctggaactccagggcaacccggattccccggaataccacctcagcctgga
taccccggaacgcctggaatacccggtggcccagcgcatccaggttatcctggtacacca
ggaattccgggcaaacctgggaaacctgggaaaccggggaaacctggtaaacctgggaaa
cctggcgtcccagcaattccagaacaaccaccatatcctggttcatccgaaactccagaa
actcccggcataccatatccaccgccatatccaccatctcctgaatatcccgtctcccct
ggtagtccaggggctcccggattgcctggaatacccggaataccaggtaaacctggcaga
cctggcaaacctggcaaacctgccaaaccaagcaaacctggacatccatcacatcctggt
taccctggaagtcccggctcaccaggtagtccgggtcatcctggttctcctggtacgcca
ggacatcctggcactcccgggacaccaggaactcctggaatacccggcacaccaccaata
cctccacgtccaggttatcccggcatccctggtacaccgggaattcccggaacacccgga
actccaccaatacctccacagccaggttatcccggcatccctggtacaccaggaattccc
ggaacacccggaactccaccaatacctccacagccaggttatcccggcatccctggtaca
ccaggaattcccggaacacccggaactccaccaatacctcctcagccaggttatcccggc
atccctggtacaccaggaattcccggaacacccggaactccaccaatacctgctcagcca
ggttatcccggcatccctggtacaccaggaattcccggaacacccggaactccaccaata
cctccacagccaggttatcccggcatccctggtacgccaggaattcccggaacacccgga
actccaccaatacctccacagccaggttatcccggcatccctggtacaccaggaattccc
ggaacacccggaactccaccaatacctccacaaccaggttatcccggcatccctggtaca
ccgggaattcccggaacacctggaactccaccaatacctccacaaccaggttatcccggc
atccctggtacaccgggaattcccggaactcccggaactccaccaatacctccacaacca
ggttatcccggtacccccggtacgccaggaactcctggaataccaggtatacctggaaaa
cctgggaaacctggcaagccgggcaggccaggaaaacctggggttccacctgtcccacca
caaccaggataccctggaacaccgccatatccagaggtccctggaaagcctgggaaacct
ggacatcatggacatcccggatcatcaaccccagatcagcctccatatcccccatatcca
ggatatcctcccgggcatgaaggcccaattggtggtgtaggtccagatggtcccaatggc
ccatggcccaatggtccggatggtcctcaaggaccaagtggcccaggtggaccaggcgga
ccaggcgggccaggtggccctgaaggtggaattggaggagtaggaggtataggtggcgat
ggacctcctggtccagatggtccatggccgacaggttcgcccggtccagatgggccatgg
cctggtgatcccgactacgtgcctggagctcacccaacaattcgtccacactacgaagga
ccaattaagattcaatatcccattaagtattacgaacctacgacgccaacctcttatgtt
tatccgttgtatggacagaagcaagtagaacggttaacctctaactctaagttcgaattg
aaatatttcaataatgaaacttcgaaggaaggctacgaaaagaacgtcgaatctacaacg
tttacatatccaagcaaaataagcggtcccataggagtgaaggatacatatataaactcg
cagtttggaaatcgatcccagagaccaggctatcagacaggacaagtgaaccaaaatgcg
gacgaaattaattccttgctgcaaacgcaacgaaaggaattgcgtaaatacacagaacag
gaagaccaaagtaactacgaagatcttaagaaaattgtatcgcaaattcctcaaactgtt
tacgacgaagtaggtcctaccactagtgagaaatactccagccgagagagattgcaacag
agctctcgcgagaatcgtaaatatccccaacaagtgacgaaattgagcgaaccggtgatt
cgaatagaaacgagccccgaagaaaatactgccgcgcttatcaaacaggtaaaccaatta
tctgaaaaatctagcgaaccgaacttcgagttcgctgcgatcggtgttcagccaccgaat
ccgatcaatatcaagccctacgagcagtctgtagggccagaccctgaaacctgtccctgt
taccttgtcgagcctggaaacgatacagtcacaaccacgagcacgacatccattcctctc
attggtcagcttggcttcattccagtagtatttgtaccatactgtccgggcaacgacgag
acggacagcgaaaacatgaaagacatgttcccctctgcaatgcctgtcccatatgcatgc
gacacgtgcggtttgcaaaccggaaaaatcgaaacgaagcttctcagcgtgaatcagctt
ggcaatatagagaatcttcgcgaggccttgcggcaagcaaaacttggctttttaaatgtt
tcagcacggcgtcggacggaaaggaggggggcgaagagtcggcacgtcaagtga
DBGET
integrated database retrieval system
