Bombus terrestris (buff-tailed bumblebee): 100652303
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Entry
100652303 CDS
T04364
Name
(RefSeq) nonsense-mediated mRNA decay factor SMG8
KO
K18734
protein SMG8
Organism
bter
Bombus terrestris (buff-tailed bumblebee)
Brite
KEGG Orthology (KO) [BR:
bter00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bter03019
]
100652303
Messenger RNA biogenesis [BR:
bter03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
100652303
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg8_Smg9
Motif
Other DBs
NCBI-GeneID:
100652303
NCBI-ProteinID:
XP_003403110
UniProt:
A0A9B0C359
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All DBs
Position
16
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AA seq
907 aa
AA seq
DB search
MRPQKFRLPCSAGSFIHTDKKVVIVSVFGKSQYSAKGCKTNMLSSILQMGLLDEPEVENE
SFCEIEGYYDSKDRTIYLHLRGLLDTHTLLTEYDKFVEKQDCKDFLSVWAHMRDKYARAL
LVLFHISHVIILTHPTHTFDYSYVHLFRAMDMVRQKVSPQLSDVLSSIYSLPKDWISNVR
PCSPRVLFYFETCPTVFQDPASGANIKKLEHSLEDQIYQVLRKNRIVTNISSNSLFAIPA
NQEFVYVHTGTTESRDILGYMAKKLIQSCKVSSGGSTSRSLASQDSNIQIDDTETETRSF
RSFLQQHINLAFARGFDDNVGRHSVPAYFEIPNVTTFCEVANKVYDYFIHGTDKELLTLH
SLLDTDVKFSKSRCSKVLPRALQTYQENLPQHYTRAYHETKLAHAMGVFEMHARGPLFEE
FNEKLQAECEKHWRSGRQMCEVLSLTGNPCTNPIHRGGSEGAGGGEQTEQRENDNDLPIR
EHCSGVRYICACNCGRCQGSREDPFSLRQANYDYFQMLAKQCGCAQLENIQFPVFQPSTH
NYRPAQLFSTKREDSFTHTESPTSEGNTQACSLGVNTLNDDIRTPYGSGGQSPPTSETNE
DVPKLSSKTSLTPSDAHKVVIEVSDSDAENAKEKSLVRQPSTTEYLPGMLHTESPAGLLP
QFSSWSLVCLGPSSLYSHNLGLQHQAGVLATSAFLLPWDVTVRLEHQKERGSLWPTIGDH
GTHNYCARGKNFQNMNTIRGRKSKGGKEFVVKIFVGVEYECPRGHRFMASAPDKVLKATG
NGIVKDSGNKVTSSTADMPLYFPCPCRQTKPLIAQLMRIHVVTPKAPVHVTVNPRVQPGP
PPCPIFVTGCDEPIKLSQSAYWVLRLPYVYMDEKGPYLAPKEPVPTSHGRLLAGMYGISE
VLPEKKI
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atgcgaccgcaaaaattccgacttccatgcagcgcaggaagttttatacacacagataaa
aaggtagtgatagtatctgtatttggaaagtcacaatatagtgcaaaaggatgcaagacc
aacatgctcagttcaatcctgcagatgggcctcctggatgaaccagaagtagaaaatgaa
tcattttgtgagattgagggatactacgattctaaagacagaactatatacttgcattta
agaggattattagatacacacacccttttaacagaatatgataagttcgtagaaaaacag
gactgtaaagatttccttagtgtatgggcacatatgagagacaaatatgctagagcacta
cttgttttatttcacatatcgcatgttattattcttactcatccaactcacacatttgac
tacagttatgtacatttattcagagccatggatatggtgagacaaaaggtttctccacaa
ctttctgatgtcttaagttccatatacagtttacccaaggactggatatcaaatgttaga
ccctgctctcctagggttctattctattttgaaacttgtcccactgtgtttcaagatcct
gctagtggagctaatatcaagaaactggagcattccttagaagatcagatataccaagta
ttgaggaaaaatcgaatagtaaccaatattagctcaaattcactgtttgcaattcctgca
aatcaagaattcgtatatgtacacactggtacgacagaatccagagatattctgggctac
atggcaaagaagctcatacagagttgcaaagttagctctggaggaagtacttcaaggagt
ttggctagtcaggattccaatattcaaatagacgatacagaaactgaaactcgttccttt
agatcatttctacaacagcatataaacctagcctttgcaagaggttttgatgacaatgtt
ggaagacactctgtacctgcctattttgagatacctaatgttacaacattctgtgaagtg
gcaaacaaagtgtacgactattttatacatggaacagataaagaactactaacattacac
agcttgttagatactgatgtaaagttcagtaagagcagatgcagtaaagtactcccacga
gcccttcagacttaccaagagaacctgccccaacactacacaagagcatatcatgaaaca
aaattggcacatgcaatgggggtctttgagatgcatgcacgaggccctttgtttgaagag
tttaatgaaaaactacaggctgaatgcgagaagcactggagatctgggaggcagatgtgc
gaagtactgtctctgacagggaatccttgcacgaatccgatacacagaggcggaagtgag
ggcgctggaggcggggaacaaacggaacaaagagagaatgacaatgatttaccaattagg
gaacattgtagtggagttcgatacatctgtgcttgtaattgtggtcgttgtcagggttca
agggaggacccattcagtctgagacaggctaactatgattattttcaaatgctagctaag
caatgtgggtgtgctcaattagagaacatacagtttcctgtttttcaaccaagcactcat
aattataggcctgcacagttgttttctactaaacgagaggactctttcactcatacagaa
tctccaacatctgaaggaaatactcaagcttgcagcttaggagttaacactttgaatgat
gatattcgaactccatatggaagtggaggacagtcacctccaacgagtgaaactaatgaa
gatgttcctaagctcagcagtaaaaccagtctaacacctagtgacgcccataaagtagtt
atagaagtgtcagatagtgacgcagaaaatgcaaaagagaaatctctagtcaggcagcct
tcaacaacagagtatctaccaggaatgttacatacagaatcaccagctggtttattgcca
caattctctagctggtccctagtttgccttggaccaagtagcctatactctcataatttg
ggtttacaacaccaagctggtgttttagccacttctgcttttcttttaccatgggatgtg
actgttagactagagcatcaaaaagaaaggggctctttgtggcctactataggtgatcat
ggaacccataactattgtgcgagaggaaagaattttcaaaatatgaatactattcgtggt
cggaaatcaaaaggcggaaaggaatttgtagtgaaaatatttgtgggagtggaatatgag
tgtccaagaggacacagatttatggcgtctgcgccggataaggtcctaaaggctactgga
aatgggattgtgaaggacagtggaaataaagtcacatccagtactgcggacatgccgctt
tattttccctgtccttgccggcaaacaaagcctctaatagctcaattaatgagaattcat
gtagtgacgccaaaagcacctgttcatgttacggtaaatcctagagtacaacctggacct
ccgccttgtccaatttttgtcactggttgcgatgaaccaataaagttatcgcaaagtgct
tactgggtcttgagattaccatacgtatatatggatgaaaagggtccatatttggcgcca
aaagaaccggtaccaacttcacacggaagactattggcaggaatgtacggaattagtgaa
gtacttccggaaaagaaaatatag
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