Bacillus thuringiensis serovar finitimus YBT-020: YBT020_01270
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Entry
YBT020_01270 CDS
T01839
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
btf
Bacillus thuringiensis serovar finitimus YBT-020
Pathway
btf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
btf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
YBT020_01270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
btf03019
]
YBT020_01270
03009 Ribosome biogenesis [BR:
btf03009
]
YBT020_01270
Enzymes [BR:
btf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
YBT020_01270
Messenger RNA biogenesis [BR:
btf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
YBT020_01270
Ribosome biogenesis [BR:
btf03009
]
Prokaryotic type
rRNA helicases
YBT020_01270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Helicase_RecD
Gypsy
Motif
Other DBs
NCBI-ProteinID:
ADY19506
LinkDB
All DBs
Position
252787..254364
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AA seq
525 aa
AA seq
DB search
MTTFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPL
LDKVDTHKESVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKKH
PHIIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETHQTLL
FSATMPDPIRRIAERFMTEPQHIKVKAKEVTMPNIQQFYLEVQEKKKFDVLTRLLDIQSP
ELAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSIEVLVATDVA
ARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKKGIAMLFVTPRESGQLKNIERTTK
RKMDRMDAPTLDEALEGQQRLIAEKLQNTIENENLAYYKRIAEEMLEENDSVTVVAAALK
MMTKEPDTTPIALTSEPPVVARGGGSKKRGGNGGGYRDGNRNRSRDGRGGDGRNRDRNRD
GRNRDGNRDRNRDGGNRGRRGEGQGRPGSSNGRGERKHHSRKPQA
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
ttgacaacatttcgagaattaggattaagtgattctttactgcaatctgttgaaagtatg
ggctttgaagaggctacgccaattcaagctgaaacaattccacatgcattgcaaggtaag
gatattattgggcaagcacaaacaggtacagggaaaacagcagcattcggattaccacta
ttagataaagtggatacacataaagaatcggttcaaggtattgttatcgcgccaacgcgt
gaattagcaattcaagttggagaagagctatacaaaattggtaaacataaacgcgttcgt
atcttaccaatttacggtggtcaagatattaaccgccaaattcgtgctctaaaaaaacac
ccacacattattgttggtacgccgggtcgtattttagatcatattaaccgtaaaacactt
cgcttacaaaacgtagagacagttgttcttgacgaagcggatgaaatgttaaacatgggc
ttcattgaagatattgaagcaattttaacagatgtgccagaaacacaccaaacattacta
ttctcagcgacaatgccggatccaatccgtcgtattgctgagcgtttcatgactgagcct
caacacattaaagtaaaagcaaaagaagtaacaatgccaaacattcagcagttctattta
gaagtgcaagaaaagaaaaagtttgatgtattgacacgcttattagacattcaatctcca
gagcttgcgattgtattcggtcgtacaaagcgtcgtgttgatgaattatcagaagcatta
aatttacgtggttatgctgcggaaggtatccatggtgatttaactcaggcgaaacgtatg
tctgtattacgtaagttcaaagaaggttctattgaagttcttgttgcaacagacgttgct
gcacgtggtcttgatatttcaggtgtaacacacgtatacaacttcgatattccacaagat
ccagaatcatacgttcaccgtattggccgtactggtcgtgcaggtaaaaaaggtattgca
atgctatttgtaacaccacgtgaatctggacaattaaaaaatatcgagcgtacaacaaaa
cgtaaaatggaccgcatggatgcaccaacacttgacgaggcactagaaggtcaacaacgt
ttaatcgctgaaaaacttcaaaacacaattgaaaatgaaaacttagcatactacaagcgt
attgcggaagaaatgttagaagagaacgactctgtaacagtagtagctgctgctttaaaa
atgatgacaaaagagccagatacaactccaatcgctttaacatcagaaccaccagttgtt
gcaagaggtggcggttctaaaaaacgcggcggtaacggaggcggataccgtgatggtaac
cgtaatcgtagtcgtgatggacgcggtggcgatggtcgtaaccgtgaccgcaatcgtgat
ggtcgtaatcgtgacggtaaccgtgatcgcaatcgtgatggcggcaaccgtggtcgtcgt
ggagaaggtcaaggtcgcccaggatcttcaaacggacgcggcgaaagaaaacatcatagc
cgtaagccacaagcttaa
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