Bacillus thuringiensis serovar finitimus YBT-020: YBT020_05775
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Entry
YBT020_05775 CDS
T01839
Name
(GenBank) helicase, UvrD/Rep family protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
btf
Bacillus thuringiensis serovar finitimus YBT-020
Pathway
btf03420
Nucleotide excision repair
btf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
btf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
YBT020_05775
03430 Mismatch repair
YBT020_05775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
btf03400
]
YBT020_05775
Enzymes [BR:
btf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
YBT020_05775
DNA repair and recombination proteins [BR:
btf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
YBT020_05775
MMR (mismatch excision repair)
Other MMR factors
YBT020_05775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
UvrD_C_2
AAA_19
Viral_helicase1
SLFN-g3_helicase
AAA_22
PhoH
AAA_30
DEAD
DXP_synthase_N
NACHT
AAA_16
Dpoe2NT
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
ADY20401
LinkDB
All DBs
Position
complement(1176271..1178604)
Genome browser
AA seq
777 aa
AA seq
DB search
MNKKLDLEQKRLDTVIKTITEQIDKLENETGRRRAEVINIRKHFWDDVKVNTDTFDDYLE
TVINLRQQAQSLAVTQITHKHTFNRLAALRRMHKAPYFGRIDFKEEGESAAEQIYIGVAT
LTDASGENFLIYDWRAPISSVYYDYPPGPAEYSTPGGVIHGNVEKKLQYIIQNGEIDSMF
DTSLTIGDEILQQALGKGTNKHMQSIVATIQREQNEIIRHDEGRLLIVQGAAGSGKTSAA
LQRIAYLLYKYREWLKADQIILFSPNSMFNSYVSNVLPELGEENMQQVTFQEYLNHRLSK
SFDIEDPYEQLEYMLTETNSPIYKTRNASIRFKASTQFFEMIRAYRQSLESSGMLFRGMK
FRGKLIVSAKEITEQFYNTDSSLRFHSRIEKLTDWLNKQIDALEKAELKKPWVEEEIELL
SKDEYQKAYKYLQKKGEFDDNSFNDFEKEAKVLGRMIVRKKLKPLRKGVQTLRFINFTGI
YKQLFTDASWVTGEKPKNWDDICSLTVNMLDEGKLYYEDATPFLLLKELIEGFQTNRSIK
HVLVDEAQDYSPFQFEFLKRLFPAARMTVLGDFNQAIFAHASETVNFDTLTNLYGPDETN
GINLTRSYRSTKPIIEFTRALVPEGKNIHAFERDGEKPTVTKVSNNSELHEHITAKVSEL
QKEQHNTIAIICKSAAESAAAYEALNHIENIKLVKSNSAEYEQGIVVIPAYLAKGIEFDA
VIIYNASKDVYSDESVRRLFYTACTRAMHELHLYSVGEVSPFILEADSESFELITTP
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaaaacttgatttagagcaaaaacgattggataccgtaataaaaacgattacg
gagcaaattgataaactggaaaacgaaactggcagacgccgggcagaagtaatcaatatt
cgtaaacacttttgggatgatgtgaaagtgaatactgatacttttgatgattatcttgaa
acagttatcaacttaaggcaacaagctcagtcactagctgttacacaaattactcataag
cacacctttaatcgacttgccgcattaagacgcatgcataaagcaccttattttggacga
attgattttaaagaagaaggagaatctgctgcggagcaaatttatatcggtgtagccacg
cttactgatgcaagcggagaaaactttcttatatatgattggcgcgcacccatttcaagt
gtgtactacgattatccaccaggaccagctgaatacagtacaccaggcggcgtaattcac
ggtaatgtggagaaaaaattacaatacattattcaaaatggcgagattgattctatgttc
gatacgagccttacaattggcgatgaaatcttgcaacaagcgctcggaaaaggtacaaac
aaacatatgcaaagtatcgtcgctacgattcagcgcgagcaaaatgaaattattcgtcac
gatgaaggccgactccttatcgtgcaaggagctgctggtagcggtaaaacgtcagctgcc
ctgcaacgaatcgcctacttattatataaatatcgcgaatggttaaaagcggatcaaatt
attctcttctcccctaactctatgttcaatagctacgtttctaacgtactacctgaactc
ggtgaagaaaatatgcagcaagtgacgttccaagaatatttaaaccatagactaagcaag
tcatttgatattgaagatccttatgaacaattagaatatatgttaactgaaacgaatagc
cctatctataaaacgagaaatgcgagcattcgatttaaagcatctactcaatttttcgag
atgattagagcgtacagacaatctcttgaatcatcaggcatgctatttagaggaatgaaa
tttagaggaaagttaattgtctctgctaaagaaattacagagcagttttacaataccgac
tcctccctccgcttccatagccgtattgagaagttaacggattggctaaataagcaaata
gatgcacttgaaaaagcagaactgaaaaagccttgggtagaagaagaaattgaactactt
agtaaagatgaatatcaaaaggcttataaatatttacagaaaaaaggtgagtttgacgac
aactcctttaacgattttgagaaagaagcgaaagtacttggacgtatgattgtccgtaaa
aaattaaaaccacttcgcaaaggtgttcaaacattgcgctttatcaatttcacaggcata
tataaacagctcttcacagatgcatcatgggttacgggagaaaaaccgaaaaactgggat
gacatttgctcattaacggtgaatatgttagatgaaggaaagctatattacgaggatgcg
actccatttttacttttaaaagaattaattgaaggcttccaaacgaatagatcaattaaa
cacgtactcgtagacgaagcgcaagattattcgccgtttcagttcgagtttttaaaacgt
ctcttccctgctgcgagaatgacggtactcggagactttaaccaagcgatctttgctcat
gcgagtgaaaccgtgaatttcgatacacttacgaatttatacgggccagacgaaacgaac
ggcattaacttaacccgtagctaccgctcaacaaaaccaattattgaatttacacgtgct
ctcgtaccagaaggaaagaacattcacgcctttgaacgtgacggcgagaaacctacagta
acgaaagtatcgaataacagcgaactgcacgagcatattaccgccaaagtttctgaacta
caaaaagagcaacacaacacgatcgcaattatatgtaaatctgcagctgaaagtgccgct
gcttacgaagcacttaatcatatcgagaatattaaactcgtgaagagtaactcagccgag
tatgagcaaggcatcgtcgtgatccctgcttacttagcgaaaggtatcgaatttgatgct
gttatcatttacaatgcttctaaagatgtatacagcgatgagagcgttcgtagattattc
tacactgcttgtacgcgcgcaatgcatgaattgcacctttatagcgttggcgaggttagt
ccttttattcttgaggctgattcggagagttttgagcttattacaacaccttga
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