Bacillus thuringiensis serovar finitimus YBT-020: YBT020_06790
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Entry
YBT020_06790 CDS
T01839
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
btf
Bacillus thuringiensis serovar finitimus YBT-020
Pathway
btf03420
Nucleotide excision repair
btf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
btf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
YBT020_06790
03430 Mismatch repair
YBT020_06790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
btf03400
]
YBT020_06790
Enzymes [BR:
btf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
YBT020_06790
DNA repair and recombination proteins [BR:
btf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
YBT020_06790
MMR (mismatch excision repair)
Other MMR factors
YBT020_06790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_12
Motif
Other DBs
NCBI-ProteinID:
ADY20604
LinkDB
All DBs
Position
complement(1365254..1367320)
Genome browser
AA seq
688 aa
AA seq
DB search
MTQEKFSQKSLTHADIPRATYHIPKTSTHLIMEEDADAAYFRALEQQNVFLNEKQLEAVR
TTEGPVLTLAGAGSGKTSVLTTRVGYLVNVKQVHPRNILLLTFTQKAAEEIRNRVANLPG
MNHAASSYVVAGTFHSVFLKLLRSQGYNQQILANEKHKQIMIKKILKELRLKDDYDAETM
LAMISLEKNKLNRPKDVKAKTPVEQEFKEVYERFEEVKQRYNYIDFDDILLETYYMLENN
APLLTQLQQRFHYIEVDEFQDTSYAQYEIVKLLASPRNNLFIAGDDDQAIYGWRGASHQI
ILSFPKEFDNTTIIALNTNYRSNPFIVGLGNEVIKLNQERFDKELYSVREEGVQPFYARP
ATTLDEANQILQLIQEKVDSGERNYKDFCLLYRTHSVSRSLLDQLTIHKIPFIKHGASQS
FYEHSLIKPVLDHLRLVIEPFRLESLSNILPTMYIGRDDCISFIEREQWKYGEGRFPSLL
HFLLLNPNLKPFQVKKVNERIDFIKFIKELEPKKALKEIIHGKGKYLEYLQSNDRSSFTM
HKDIQEEMLEELMESANRFTDIPAYLQFIDEAIQGQKEMEALKTMPQKDAVSLMSIHNAK
GLEFPCVFLLGASDGILPHTSSLKDANDRVTETSEALEEERRLLYVAITRAKEELYISSP
QFFRGKKLDISRFLYTVRKDLPEKTSTK
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atgacacaagaaaaattttcacaaaaatcattaacgcacgctgatattccacgtgcaaca
tatcatatcccaaaaacatctacccatttaattatggaagaagatgcagatgcggcgtat
ttccgcgctctcgaacagcaaaatgtatttttaaatgaaaaacaattagaagccgtacga
acgacagaaggccctgttcttacactggctggtgccggaagcgggaaaacatctgtttta
acaactcgcgtcggttatttagtaaatgtaaaacaagttcatccgcgaaatattttatta
cttacatttacacaaaaagcggctgaagaaatccgaaatcgtgtagcgaatttaccgggt
atgaatcatgcggcaagtagctacgttgttgctggtacattccactctgtctttttaaaa
ttgcttcgtagtcaaggatataatcagcaaattttagcaaacgaaaaacataaacaaatt
atgataaagaaaattttaaaagaattgcgtttaaaagacgattatgatgctgaaacgatg
ctcgcgatgatttcacttgagaaaaacaaattaaatcgtccgaaagatgtaaaagcaaaa
acacccgttgaacaagaatttaaagaagtatacgagcgttttgaagaagtgaaacaacga
tataattatattgatttcgatgacatcttattagaaacatattatatgttagaaaataac
gctcctttgcttacccaattacaacaacgtttccactatattgaagtagatgagttccaa
gatacatcgtatgctcaatatgaaattgtaaaattgttagcttcgccaagaaataattta
tttatcgcaggtgatgacgatcaagctatatacggctggcgaggagcaagtcaccaaatt
attttatcttttccaaaagaatttgataacactacgattatcgcccttaatacgaattat
cgatccaatccttttattgtcggacttggaaatgaagttatcaaactaaatcaagaaagg
tttgataaagagctatattctgttcgtgaagaaggtgtacaacctttttatgcaagaccg
gctacgactcttgatgaagcaaatcaaattttgcagctcattcaagaaaaagtagatagt
ggtgaacgaaattataaagatttttgtttgctgtatcgcacacattctgtaagccgttcg
ttacttgatcagcttaccattcataaaatcccgtttattaagcacggtgcgagtcagtca
ttttatgaacattctttaattaagcctgtattggatcatttacgactcgtaattgaacca
tttcgattagaatcactttcaaacatattaccaacgatgtatatcgggcgtgatgattgt
atttcatttattgaacgtgaacaatggaaatatggtgaaggccgtttcccttctcttctt
catttcttattattaaatccgaacttaaaaccttttcaagtgaaaaaggtaaatgagcgt
atcgattttattaaatttataaaagaattagaaccgaaaaaagcattaaaagaaattatt
catggtaaaggaaagtatttagagtacttacaaagtaacgatcgttcttcctttacgatg
cataaagatatacaagaagaaatgttagaagaattaatggagtcagcaaatcgtttcacc
gacattccagcttatttacaatttattgatgaagccattcaagggcaaaaagaaatggaa
gcattaaaaacaatgccgcaaaaagatgctgtttcgcttatgtctattcataacgcaaaa
ggccttgaatttccatgtgtctttttactcggggcgagcgatggtattctgcctcatact
tcttctttaaaagatgcaaacgatcgtgttacagagacttctgaagctttagaagaagaa
cgccgactactttatgtcgcaattacacgtgcgaaagaagaattgtacatttcctctccg
caattttttagaggaaaaaaattagatatatctcgctttttgtatactgtgcgaaaagat
ttacctgaaaagacatccacgaaataa
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