Bacillus thuringiensis serovar finitimus YBT-020: YBT020_14910
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Entry
YBT020_14910 CDS
T01839
Name
(GenBank) hypothetical protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
btf
Bacillus thuringiensis serovar finitimus YBT-020
Brite
KEGG Orthology (KO) [BR:
btf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
btf03016
]
YBT020_14910
Enzymes [BR:
btf01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
YBT020_14910
Transfer RNA biogenesis [BR:
btf03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
YBT020_14910
Prokaryotic type
tRNA splicing ligases
YBT020_14910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
DUF6922
SpoIISA_toxin
Motif
Other DBs
NCBI-ProteinID:
ADY22212
LinkDB
All DBs
Position
complement(2897440..2898627)
Genome browser
AA seq
395 aa
AA seq
DB search
MLKLQGKYNEAKVFTNNVDETATGQIIDLCNQEFVKDSQIRIMPDTHAGAGCTIGTTMTI
QDKIVPNLVGVDIGCGMEVVVIDKKKEEINFDYLDEIIRKFVPSGFRIRDKEHRFSKMID
FDRVRAPFTLQRAQKSIGTLGGGNHFIELNEDDKGNVYIVIHSGSRNLGKQIAEYYQNFA
YEQLIDVTSMKDEIIKRLTEEGRAKEIQETLRGIQKPKIRKELAYLEGQGFKDYMNDMNI
AQKYAGLNRKAMIDEIVTKMDWKVTDQFTTIHNYIDIENMILRKGAISAQKDERVIIPIN
MRDGSIIAFGKGNPDWNFSGPHGAGRIMSRKKAKELLSLEDFQNTMTEVWTTSVAESTID
EAPMVYKPMNEIIENTKETIDIKHIIKPLYNFKAN
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgttgaaattacaaggaaaatacaatgaagcgaaagtatttacgaataacgttgatgag
actgcgacagggcagattattgatctttgtaaccaagaatttgtaaaggatagtcaaatt
cgtattatgccagatacacatgcgggagcagggtgtacgattgggacaacaatgacaata
caagataaaatcgttcctaatcttgtaggggtagacattggttgtggtatggaagttgtt
gtaattgataagaaaaaagaagaaattaatttcgattatttagacgaaataattcgtaaa
ttcgttccaagtggttttcgtatacgagataaagaacatcgattctcaaaaatgattgat
tttgatagggtgagagcaccatttacattacaacgcgctcaaaaaagtataggtactctt
ggaggagggaatcatttcatcgaactaaatgaagacgataaagggaatgtatatattgtc
attcatagtggttctcgtaatttaggtaaacaaatagcagagtattaccaaaacttcgca
tatgaacaactcattgatgttacatcaatgaaagatgagattattaagagattaactgaa
gagggtagagcaaaagaaatacaagaaactttacgtggaattcagaagccaaagattcgt
aaagaactagcttatttagaaggacagggattcaaagattatatgaatgacatgaatatt
gctcaaaagtatgctgggttaaatcgtaaagcaatgattgatgaaattgttacgaaaatg
gactggaaagtaaccgatcaatttactacaatacataactatatagacatagaaaatatg
attctacgaaaaggtgctatttcagctcagaaagatgaacgagtcattattccaattaac
atgagagatggttcaattattgcatttggtaaaggtaatccagactggaatttttctggt
ccgcatggggcaggacgtatcatgagtcgtaagaaggctaaagaattattgagtctagag
gacttccaaaatacgatgacagaagtttggactacatcggtagcagagagcacaattgat
gaggcgccaatggtatacaagccaatgaatgaaattatcgaaaatacgaaagagacaata
gatataaagcatattattaagccattatataattttaaagcgaattaa
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