Bacillus thuringiensis serovar finitimus YBT-020: YBT020_18615
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Entry
YBT020_18615 CDS
T01839
Name
(GenBank) metallo-beta-lactamase family protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
btf
Bacillus thuringiensis serovar finitimus YBT-020
Pathway
btf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
btf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
YBT020_18615
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
btf03019
]
YBT020_18615
Messenger RNA biogenesis [BR:
btf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
YBT020_18615
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
RMMBL
Lactamase_B
Lactamase_B_2
Anti-Pycsar_Apyc1
PDEase_II
Motif
Other DBs
NCBI-ProteinID:
ADY22951
LinkDB
All DBs
Position
complement(3650912..3652582)
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AA seq
556 aa
AA seq
DB search
MKRKENESVKVFALGGVGEIGKNMYCVEIDSEIFIVDAGLMFPGDEMFGIDIVIPDITYL
VENQERVKGLFITHGHEDHIGGIVYVLRKLSIPVYATKLTVGLIQEKLGEAGMLGRVDLK
TIDSNSTVEFNTTTVSFFGTTHSIPDSVGVCFHTSKGAIVYTGDFKFDQTPIGNSGADLG
KMAQIGNEGVLCLLSDSTNAERPGYTGSEKEVGVEISKVFYGAEGRIIVASFASNVHRIQ
QVFDAAAETGRKVAVVGRSMVKVVDIARRLGYLDVPEGMVISLQEVDNFPEKKVAILTTG
SQGEPMAALSRMAKQAHKQISIRKGDTVIIAASPIPGNEISVSKIIDLLFRAGAEVVYYG
ERKVHVSGHGSQEELKLMLNLMKPKYFVPVHGEFRMQKAHAYLAEDVGIARENIFIVEKG
DVIGFGDDEANLVGKVQAGNVLIDGLGVGDVGNIVLRDRKMLSQDGILVVVVTLGKDEKK
IISGPEIISRGFVYVRESEALIDRSTEIVRMIVEQSIKEYSIEWSMLKQNIRELLGQFLY
EETKRKPMILPIIMEV
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgaagagaaaagagaatgagtctgttaaagtatttgctcttggtggagtaggtgaaatc
gggaaaaacatgtactgtgttgaaattgattctgaaatctttattgtagatgcagggtta
atgttcccgggagatgaaatgtttggaattgatatcgttattcctgatattacatattta
gtagaaaaccaagagcgagtaaaaggtttatttattactcacggtcatgaagatcatatt
ggtggcattgtttacgtacttcgtaaattatcaattccagtgtatgcaacgaaattaacg
gtaggacttatacaagaaaaacttggcgaagcgggtatgttaggccgtgtagatttaaaa
acaatcgattcaaattcaacagtagaatttaatactacaacggtgtcgttctttggaaca
acacatagtattccagattctgttggtgtttgtttccatacatcaaaaggtgcgatcgta
tatacgggagactttaaattcgatcaaactccaattggaaatagtggagcagaccttggg
aaaatggctcaaatcggaaatgaaggcgttctatgcttattatctgatagtacaaatgct
gagcgtccaggctatacaggttctgaaaaagaagttggtgtagaaatttctaaagtgttt
tacggcgcagaaggacgtattatcgttgcttcatttgcatcgaatgtacatcgtattcaa
caagtatttgatgcagctgctgaaacaggacgaaaagtagcggttgtaggacgtagtatg
gtgaaagtggtagatatcgcaagacgtcttggttatttagatgttccagaaggtatggtt
atttcactacaagaagtagacaatttcccagagaaaaaggtagctattttaacgacaggt
agccaaggtgaaccgatggcagccctttctagaatggcaaagcaagctcataaacaaatt
tcaattcgtaaaggtgatacggttattatcgcggcatctccaattccaggtaatgaaata
tctgtatcgaaaattattgatttgttatttagagcgggagctgaagttgtttattacggt
gaaagaaaagttcacgtttcaggtcacggtagccaagaagaattaaaattaatgttaaat
ttaatgaaaccgaaatattttgtacccgtacatggtgagttccgtatgcaaaaagcacat
gcatacttagctgaagatgtaggtattgcaagagaaaatatctttattgtagaaaaaggc
gatgtaattggttttggtgatgatgaagcgaacttagttggcaaagtgcaagctggcaat
gtgttaattgatggattaggtgtaggtgatgttggtaatatcgttctgcgagatagaaaa
atgttatctcaagatggaatattagtagttgttgtaacactgggtaaagatgaaaagaaa
attatctctggtccagaaatcatttcacgtggatttgtatatgtacgtgaatcagaagcg
ttaattgaccgttctacagagattgtacgtatgattgttgagcaatcaattaaagaatat
tcaattgaatggtctatgttaaaacaaaatattcgtgaattattaggacagttcttgtac
gaagagacgaagagaaaacctatgattttaccgattattatggaagtataa
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