Bacillus thuringiensis serovar finitimus YBT-020: YBT020_22640
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Entry
YBT020_22640 CDS
T01839
Symbol
dnaE
Name
(GenBank) DNA polymerase III DnaE
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
btf
Bacillus thuringiensis serovar finitimus YBT-020
Pathway
btf03030
DNA replication
btf03430
Mismatch repair
btf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
btf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
YBT020_22640 (dnaE)
03430 Mismatch repair
YBT020_22640 (dnaE)
03440 Homologous recombination
YBT020_22640 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
btf03032
]
YBT020_22640 (dnaE)
03400 DNA repair and recombination proteins [BR:
btf03400
]
YBT020_22640 (dnaE)
Enzymes [BR:
btf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
YBT020_22640 (dnaE)
DNA replication proteins [BR:
btf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
YBT020_22640 (dnaE)
DNA repair and recombination proteins [BR:
btf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
YBT020_22640 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HROB
tRNA_anti_2
Flavokinase
Motif
Other DBs
NCBI-ProteinID:
ADY23756
LinkDB
All DBs
Position
complement(4417067..4420393)
Genome browser
AA seq
1108 aa
AA seq
DB search
MKFVHLQCQTVFSLLKSACKIDELVVRAKELGYSSLAITDENVMYGVIPFYKACKKHGIH
PIIGLTASIFSEEEEKPYPLVLLAENEIGYQNLLKISSSIMTKSKEGIPKKWLAHYAKGL
IAISPGKDGEIEQLLLEDKESQAEEVARMYRSMFGNFYMSLQHHAIQDELLLQEKLPEFT
SRINIPVVATNDVRYINQSDALVHECLLSVESGTKMTDPDRPRLKTDQYYLKSSDEMEAL
FSHVEEAIYNTVEIAERCRVEIPFHVNQLPKFPVPANETNDTYLRRVCEEGLQKRYGTPK
EVHINRLNHELNVISSMGFSDYFLIVWDFMKYAHENHILTGPGRGSAAGSLVSYVLEITD
IDPIEYDLLFERFLNPERVTLPDIDIDFPDIRRDEMIRYVKDKYGQLRVAQIVTFGTLAA
KAAIRDIARVMGLPPRDIDIFSKLIPSKLGITLKDAYEESQSLREFIQGNLLHERVFEIA
KRVEGLPRHTSIHAAGVIMSQEPLTGSVAIQEGHNDVYVTQYPADALEELGLLKMDFLGL
RNLTLLENIIKFIMQKTGKEIDIRNLPLQDEKTFQLLGRGDTTGVFQLESGGMRNVLRGL
KPNEFEDIVAVNSLYRPGPMEQIPTFIESKHGKRKIEYLHPDLKPILERTYGVIVYQEQI
MQIASKLAGFSLGEADLLRRAVSKKNRDILDQERKHFVQGCLQNGYDETSAEKIYDLIVR
FANYGFNRSHAVAYSMIGYQLAYLKANYTLEFMTALLSSAIGNEDKIVQYIRETKRKGFH
VLPPSLQRSGYNFQIEGNAIRYSLLSIRNIGMATVTALIEEREKKMFEDLFEFCLRMPSK
FVTERNLEAFVWSGCFDDFGVSRTNLWKSLKGALEYANLARDLGDAVPKSKYVQGEELSF
IEQLNKEKEVLGFYLSSYPTAQYVKLAKELEIPSLAQAMRHKKKVQRAIVYITSVRVIRT
KKLQKMAFITFCDQNDEMEAVLFPETYIHFSDKLQEGAIVLVDGMIELRNHKLQWIVNGL
YPLEEMDAYEEKKDASVYVKLPSQYEKKLLNQVTKILFDYSGFAKVLIYYEKEHKMVQLS
RSLSIHPSEECLGALREIVGEENVVVKI
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
gtgaagtttgtgcatttacaatgtcaaaccgtttttagtttattaaaaagtgcttgtaaa
attgatgaacttgtagttagggcgaaagagctcggttattcatcacttgctattacggat
gagaatgttatgtatggcgttattccgttttataaagcatgtaagaaacatggtatacat
cctattatcggcttaacagcttctatttttagtgaagaagaagaaaagccttatccgctt
gtcttacttgctgaaaatgaaataggttatcaaaatttattaaagatttctagtagcatt
atgacgaagtcaaaagaaggtattcctaagaaatggcttgcacattatgcgaaaggatta
attgcaatttcaccaggtaaagatggggaaattgaacaattattattagaagacaaagag
agtcaagctgaagaagtagctcgcatgtatcgaagtatgttcggtaatttttatatgagt
ttacagcatcatgcgattcaagatgaactgcttctgcaagagaaattacctgaatttacg
agtaggataaatattccagtcgttgcaacaaacgatgtacgctacatcaatcaaagtgac
gcacttgttcatgaatgcttattatctgttgaaagtggaacgaaaatgacggatccagat
aggccgaggctgaaaacagatcaatattatttaaaatcatcagatgaaatggaagcactg
ttttctcacgtagaagaagcgatttataacacagtagaaattgcagaacgttgcagagta
gaaataccgtttcatgtaaatcaattaccgaaatttcctgttccagcgaacgagacgaat
gacacgtatttgcgccgcgtttgtgaagaagggttacagaaacgttatggtacgccgaaa
gaagtacatataaaccgtttgaatcatgaattaaacgtgatttctagtatggggtttagt
gattatttcctcatcgtatgggattttatgaagtatgcgcatgaaaatcatattttaaca
gggccaggacgtggatcggcggctggatcactcgtttcttacgtattagaaattacagat
attgatccaattgaatacgatctattatttgaaaggtttttaaatcccgaacgtgtgaca
cttccagatattgatatcgattttccagatataagacgtgatgagatgattcgatatgtg
aaagataaatatggtcagcttcgtgttgcacaaattgtaacgtttgggacgttggcagcg
aaagcggcaattagagatattgcgcgtgtgatggggcttccgccgcgagatattgatata
ttctcaaaacttattccatcaaagcttggtataacgttaaaagatgcatatgaggaatcg
caatcactccgtgagtttatacaagggaatcttttgcacgagcgtgtgtttgaaattgca
aaacgtgtagagggcttaccacgtcatacgtctattcatgcagctggcgttattatgagc
caagagccattaaccgggagtgttgcaattcaagaaggacataacgatgtgtatgttacg
caatacccagctgatgcattagaagaacttgggttgctcaagatggactttttaggatta
cgtaatttaacgttacttgaaaatattataaagtttatcatgcaaaaaacagggaaagaa
atcgatataagaaatttaccacttcaagatgaaaagacattccaattgttaggtagaggg
gatacaacaggtgtattccagcttgaatcaggtggtatgcgaaatgtacttcgcgggtta
aagccgaatgagtttgaagatattgtcgctgttaactcgttatatagaccaggaccgatg
gaacaaattccaacctttatcgaatcaaagcacggaaaaagaaaaattgaatatttacat
ccggacttaaagccgattttagaaagaacatacggtgtaattgtataccaagaacaaatt
atgcaaatcgcgtcgaagttggcgggcttctcgctcggagaagcagatttattacgccgt
gcagtgagtaaaaaaaatcgtgatattttagatcaggaacgtaagcattttgtgcaaggg
tgtttacaaaatggttatgacgagacatctgcagagaaaatttacgatttaattgtaaga
tttgcaaattacggctttaaccgaagtcacgctgtagcctacagtatgattggatatcag
cttgcttacttaaaagcgaattatacgctggaatttatgacggcactattatcgagtgca
attggaaatgaagataagattgtgcagtatatacgcgaaacgaagcgaaaaggttttcat
gttttgccgccgtctcttcagagaagtggttacaatttccaaatagaaggaaatgcgata
cgttacagcttactttctattcgaaacatcggaatggctacagtgacagcattaatcgaa
gaacgagagaaaaaaatgtttgaagatttatttgaattttgtctgcgcatgccatcaaag
tttgtaacagagcgaaatttagaggcgttcgtctggtctggatgttttgacgatttcggt
gtttcgagaacgaatttatggaaaagtcttaaaggagcgttagagtatgccaatcttgca
cgtgatttaggagatgctgttccaaaatcaaaatacgtacaaggagaagagctctccttt
attgaacagttaaataaagagaaggaagtactaggtttttatttatcaagctatccgaca
gcgcagtatgtgaagttagcgaaagaattagaaattccatctctcgctcaggcgatgcga
cataagaaaaaagtacaaagagctatcgtgtatataacaagtgtgagagtgattcgtacg
aaaaagttgcaaaagatggcgtttattacattttgtgatcaaaatgatgaaatggaagca
gttcttttccccgaaacgtatatacatttctcagataagttacaagaaggagcaattgtt
ttagttgacggcatgattgagcttagaaatcataagttgcaatggattgtaaatggacta
tatccgttagaagaaatggatgcgtatgaggaaaagaaagatgcgtctgtttacgtgaaa
ttgccgtctcagtatgagaaaaagcttttaaatcaagttactaaaatattgtttgactat
tcgggttttgcgaaagtactaatttattatgaaaaggaacataaaatggtacaattatct
cgaagtttatcgattcatccaagtgaagaatgtttaggagcacttcgtgaaattgtcggg
gaagaaaatgtggttgtgaaaatataa
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