Bacillus thuringiensis serovar finitimus YBT-020: YBT020_29416
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Entry
YBT020_29416 CDS
T01839
Name
(GenBank) HfQ protein (RNA-binding protein)
KO
K03666
host factor-I protein
Organism
btf
Bacillus thuringiensis serovar finitimus YBT-020
Pathway
btf02024
Quorum sensing
btf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
btf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
YBT020_29416
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
YBT020_29416
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
btf03019
]
YBT020_29416
03036 Chromosome and associated proteins [BR:
btf03036
]
YBT020_29416
Messenger RNA biogenesis [BR:
btf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
YBT020_29416
Chromosome and associated proteins [BR:
btf03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
YBT020_29416
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
Hfq_1
Motif
Other DBs
NCBI-ProteinID:
ADY25035
LinkDB
All DBs
Position
pBMB28:137802..138035
Genome browser
AA seq
77 aa
AA seq
DB search
METKLQSFQKDRGKNILFSQEHLLQEAFQKKKDITLILLKGLHIKGIIRGYDTFSILIEY
EGKQQLVYKHAISTIRF
NT seq
234 nt
NT seq
+upstream
nt +downstream
nt
ttggaaacgaaattacaatcatttcaaaaggatagaggtaagaacatactattttcacag
gaacacttattacaagaagcgtttcaaaagaagaaggatatcacgttaatcctgttaaaa
ggactacatataaaaggaataataagaggatatgatactttttctattttaatagaatat
gaggggaaacaacagcttgtatataaacatgcaatctccacgattcgattctaa
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