Bacillus thuringiensis Bt407: BTB_c01250
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Entry
BTB_c01250 CDS
T02277
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
btg
Bacillus thuringiensis Bt407
Pathway
btg03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
btg00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BTB_c01250 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
btg03021
]
BTB_c01250 (rpoC)
03400 DNA repair and recombination proteins [BR:
btg03400
]
BTB_c01250 (rpoC)
Enzymes [BR:
btg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BTB_c01250 (rpoC)
Transcription machinery [BR:
btg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BTB_c01250 (rpoC)
DNA repair and recombination proteins [BR:
btg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BTB_c01250 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_3
RNA_pol_Rpb1_2
RNA_pol_Rpb1_4
RPOC_hybrid
Motif
Other DBs
NCBI-ProteinID:
AFV15908
LinkDB
All DBs
Position
117283..120894
Genome browser
AA seq
1203 aa
AA seq
DB search
MIDVNNFEYMKIGLASPDKIRSWSYGEVKKPETINYRTLKPEKDGLFCERIFGPQKDWEC
HCGKYKRVRYKGVVCDRCGVEVTRAKVRRERMGHIELAAPVSHIWYFKGIPSRMGLVLDM
SPRALEEVIYFASYVVTESGDTPLDKKQLLSEKEYRAYRDRYGSTFQAAMGAEAIKKLLQ
DIDLDKEVDFLKEELKTAQGQRRTRAIKRLEVLEAFRNSGNEPSWMILDVLPVIPPELRP
MVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPSIIVQNEKRMLQEAVDALIDNGR
RGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPNLKMYQCGLPKE
MALELFKPFVMKELVGKGLAHNIKSAKRKIERVHPEVWDVLESVIKEHPVLLNRAPTLHR
LGIQAFEPTLVEGRAIRLHPLVCTAYNADFDGDQMAVHVPLSSEAQAEARILMLAAQNIL
NPKDGKPVVTPSQDMVLGNYYLTLEREGAIGEGMVFKDANEAILAYQNGYVHLHTRIAVA
ASSVNNVTFTEEQKGKLLLTTVGKLIFNEILPESFPYINEPTNSNLEKETPAEYFVEKGA
NIKEIIASREEVAPFSKKILGNIIAEVFKRFQITETSRMLDRMKNLGFKYSTKAGITVGV
SDILVLGEKDEILHEAQAKVDNVIKQFRRGLITEEERYDRVISIWSNAKDVIQGKLMKSL
NKRNPIFMMSDSGARGNASNFTQLAGMRGLMANPSGRIIELPIKSSFREGLTVLEYFIST
HGARKGLADTALKTADSGYLTRRLVDVAQDVIVREDDCGTDRGLLIGAIKEGNEVIESLY
DRLVGRFARKTVKHPETGEVLVSENQLITEDIAHIVENSGVETVNIRSAFTCNTRHGVCK
KCYGRNLATGTDVEVGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRIQEIF
EARNPKGQAVISEIDGVIAAINDVKDRQEVVVQGEVEARTYAIPYGARLKVTPGQPISHG
KELTEGSIDPKELLKVTDITAVQEYLLREVQKVYRMQGVEIGDKHVEVMVRQMLRKVRVS
DAGETDVLPGTLLDIHQFTDANAKVLLKGKQPATARPVLLGITKASLETDSFLSAASFQE
TTRVLTDAAIKGKRDELLGLKENVIIGKLVPAGTGMNRYRKVDLVKTTQDNMNVENDEIY
VEQ
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
ttgatagatgtaaataactttgaatatatgaagattggacttgcttcacctgacaagatt
cgttcttggtcatacggtgaagttaagaaaccagaaactattaactatcgtacgttaaag
cctgaaaaagatggcttgttctgtgagcgtattttcggaccacaaaaggactgggaatgt
cattgcggaaaatacaaacgtgtacgttataaaggtgtagtttgtgatcgatgtggcgtt
gaagtaacgcgtgcaaaagtacgtcgtgaacgtatgggtcatattgaattagctgctcct
gtatctcatatttggtatttcaaaggtatcccgagccgcatgggacttgtcttagacatg
tcccctcgcgcgcttgaagaagtaatttatttcgcttcttatgttgtaacagaaagtgga
gatacaccacttgataagaagcaattactttctgaaaaagaataccgtgcatatcgtgat
cgatatggtagcacattccaagctgctatgggtgcagaagcgattaaaaagctactacaa
gacattgatttagataaagaagtagacttcttaaaagaagaattaaaaacagcacaagga
caacgccgtactcgtgctattaaacgtctagaagtattagaagcattccgtaactctgga
aatgaaccatcttggatgatcttagatgttctaccagttatcccaccagaactacgccca
atggtacagttagatggtggacgttttgctacttctgacttaaacgacttatatcgtcgt
gtaattaaccgtaacaaccgtttaaaacgtctattggacctaggtgctccaagcatcatc
gttcaaaacgaaaaacgtatgttacaagaagctgtagatgcattaattgataatggtcgt
cgtggccgtccagtaactggaccaggtaaccgtccattaaaatcattatctcacatgctt
aaaggtaaacaaggacgtttccgtcaaaacttattaggtaaacgtgttgactactctggc
cgttctgtaatcgttgtaggaccgaacttaaagatgtaccaatgtggattaccgaaagaa
atggcgcttgaactgttcaaaccttttgttatgaaagagttagttggaaaagggttagca
cacaacattaagagtgcgaaacgtaaaattgagcgtgtacaccctgaagtttgggacgtt
ttagaatctgtgattaaagaacatccagtacttctaaaccgcgcaccaacacttcaccgt
cttggtatccaggcgtttgaacctacattagtagaaggtcgcgcaattcgtcttcaccca
cttgtatgtactgcatacaacgcggactttgacggtgaccaaatggcggttcacgttccg
ttatcatcagaggcacaagcagaagctcgtattcttatgttagcggcacaaaacatcttg
aatccaaaagacggaaaaccagttgttactccatctcaggatatggtattaggtaactac
tacttaacacttgagcgtgaaggcgcaatcggtgaaggtatggtcttcaaagatgcaaac
gaagcaatacttgcatatcaaaatggatatgtacatctgcacacacgtattgcagttgct
gcaagttcagtaaataacgtaacgtttactgaagagcaaaaaggtaagcttctattaaca
acagttggtaaattaatatttaacgaaatcttaccagagtcgttcccttatattaatgaa
ccgacaaactcaaaccttgaaaaagaaacaccagcggaatatttcgttgaaaaaggtgcg
aacattaaagaaattattgctagtcgcgaagaagtggcgccatttagcaagaagatcctt
ggtaacatcattgcggaagtgttcaaacgtttccaaattacagaaacgtctcgcatgctt
gaccgtatgaaaaacttagggttcaagtactctacaaaagctggtattacagttggggta
tctgacattcttgtattaggcgaaaaagatgaaattctccacgaagcacaagcaaaagta
gataatgtaattaaacaattccgtcgcggtttaatcacggaagaagaacgttacgatcgc
gttatctctatttggagtaatgcaaaagatgttatccaaggaaaactgatgaaatccttg
aataaacgcaatccaatcttcatgatgagtgactcaggtgcccgtggtaacgcatctaac
tttactcagcttgctggtatgcgtggtctgatggccaatccatctggtcgtatcatcgaa
cttccaatcaaatcgagtttccgtgaaggtttaacagtacttgagtacttcatctctacg
catggtgcgcgtaaaggtcttgccgatacagcacttaaaactgccgattctggttactta
acacgtcgtcttgtagacgttgcacaagatgtaattgtccgtgaagatgattgtggaaca
gatcgtggtctattaattggtgcgattaaagagggtaatgaagtaattgagtcattatat
gatcgtcttgttggacgttttgcaagaaaaactgtaaaacatcctgaaacaggtgaagta
ttagttagtgaaaaccaattaattactgaagatatcgctcatatcgttgaaaattcgggt
gttgaaactgtaaatattcgttcagcgtttacgtgtaacactcgccatggtgtatgtaag
aagtgttacggtcgtaacttagcaactggtacagacgtagaagtaggagaagcggtaggt
attatcgcagctcaatctatcggtgagccaggtacacagttaacgatgcgtacattccat
acaggtggggttgccggagatgatatcactcaaggtttacctcgtatccaagagatcttc
gaagctcgtaatccgaaaggtcaggcagttatcagtgaaatcgacggtgttatcgcagcg
atcaacgatgttaaagatcgccaagaagtagttgtacagggtgaagttgaagctcgtacg
tatgctattccttacggtgctcgtctgaaagtaactccaggacagccaattagccacggt
aaagagttaacagaaggttctattgatccgaaagaattactaaaagtaacggacattaca
gcagttcaagaatacttattacgtgaagttcaaaaagtataccgtatgcaaggggtagaa
attggtgacaaacacgtagaggtaatggtacgtcaaatgctacgtaaagttcgtgtaagt
gatgcaggtgaaacagacgtattaccaggaacattactagatatccatcagtttactgat
gcgaatgcgaaggtgttactgaaaggtaaacaaccagcgacagctagacctgttctactt
ggtattacaaaagcttcacttgaaactgattcattcttatctgcagcatcattccaagaa
acaactcgtgtcttaactgatgcagcaattaaaggtaaacgtgatgagcttctaggattg
aaagagaacgttattatcggtaaacttgttcctgctggaacaggtatgaatcgttatcgc
aaagtggatcttgtaaaaacaacacaagataacatgaatgtagaaaacgatgagatttat
gtggaacagtaa
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integrated database retrieval system
