Bacillus thuringiensis Bt407: BTB_c12750
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Entry
BTB_c12750 CDS
T02277
Symbol
yjcD
Name
(GenBank) putative ATP-dependent DNA helicase YjcD
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
btg
Bacillus thuringiensis Bt407
Pathway
btg03420
Nucleotide excision repair
btg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
btg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BTB_c12750 (yjcD)
03430 Mismatch repair
BTB_c12750 (yjcD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
btg03400
]
BTB_c12750 (yjcD)
Enzymes [BR:
btg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BTB_c12750 (yjcD)
DNA repair and recombination proteins [BR:
btg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BTB_c12750 (yjcD)
MMR (mismatch excision repair)
Other MMR factors
BTB_c12750 (yjcD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_12
Motif
Other DBs
NCBI-ProteinID:
AFV16970
LinkDB
All DBs
Position
complement(1239122..1241188)
Genome browser
AA seq
688 aa
AA seq
DB search
MTQEKFSQKSLTHADIPRATYHIPKTSTHLIMEEDVDAAYFRALEQQNVFLNEKQLEAVR
TTEGPVLTLAGAGSGKTSVLTTRVGYLVNVKQVHPRNILLLTFTQKAAEEIRSRVAKLPG
MNHAASSYVVAGTFHSVFLKLLRSQGYNQQILANEKHKQIMIKKILKELRLKDDYDAETI
LAMISLEKNKLNRPKDVKAKTPVEQEFKEVYERFEEVKQRYNYIDFDDILLETYYMLENN
APLLTQLQQRFHYIEVDEFQDTSYAQYEIVKLLATPRNNLFIAGDDDQAIYGWRGASHQI
ILSFPKEFDNTTIIALNTNYRSNPFIVGLGNEVIKLNQERFDKELYSVREEGVQPFYARP
ATTLDEANQILQLIQEKVDSGERNYKDFCLLYRTHSVSRSLLDQLTIHKIPFIKHGASQS
FYEHSLIKPVLDHLRLVIEPFRLESLSNILPTMYIGRDDCISFIEREQWKYGEGRFPSLL
HFLLLNPSLKPFQVKKVNERIDFIKFIKELEPKKALKEIIHGKGKYLEYLQSNDRSSFTM
HKDIQEEMLEELMESATRFTDIPAYLQFIDEAIQGQKEMEALKTMPQKDAVSLMSIHNAK
GLEFPCVFLLGASDGILPHTSSLKDANDRVTETSEALEEERRLLYVAITRAKEELYISSP
QFFRGKKLDISRFLYTVRKDLPEKTSTK
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atgacacaagaaaaattttcacaaaaatcgttaacacacgctgatattccgcgtgcgaca
tatcatattccgaaaacatctacccatttaattatggaagaagatgtagatgcggcttat
ttccgcgctctcgaacaacaaaatgtttttttaaacgaaaaacaattagaagccgtgcgc
acaacagaaggtcctgttctcacactagctggtgctggaagcgggaaaacatctgtttta
acaactcgcgttggttatttagtaaatgtaaaacaagtccatccacgaaatattttatta
cttacatttacacaaaaagcagctgaagaaatccgaagtcgtgttgcgaagttaccaggt
atgaatcatgcagcaagtagctatgttgttgctggtacattccactctgttttcttaaaa
ttgcttcgtagtcaagggtataatcagcaaattttagcaaatgaaaaacataaacaaatt
atgataaagaaaatcttaaaagaattgcgtttaaaagacgattatgatgcggaaacgata
ctcgcgatgatttcacttgaaaaaaacaaattaaatcgtccgaaagatgtaaaagcgaaa
acaccagtggaacaagaatttaaagaagtatatgaacgttttgaagaagtaaaacaacga
tacaattatattgatttcgatgacatcttattggaaacatattatatgttagaaaataat
gctcctttactaactcaattacaacaacgttttcactacattgaagtagatgagtttcaa
gatacatcgtatgcacaatatgaaattgtaaaattgttagccacaccaagaaataatttg
ttcatcgcaggtgatgatgatcaagctatctatggctggcgaggggcaagtcaccaaatt
attttatcttttccaaaagaatttgataacacaacaatcattgcactaaatacgaattat
cgatctaatccctttatcgtcgggcttggaaatgaagttataaaattaaatcaagaacgt
tttgataaagagctatactccgttcgtgaggaaggtgtacaacctttttatgcaagacct
gctacgactcttgatgaagcaaatcaaattttacagctcattcaagaaaaagtagatagc
ggtgaacgaaactataaagatttttgtttactatatcgcacacattctgtaagccgttcg
ttacttgatcagcttaccattcataaaatcccgtttattaaacacggggcgagccaatca
ttttatgaacattctttaattaagcctgtattagatcatttaagactcgtgattgagccg
tttcgactagaatcactttcaaacatattgccgacgatgtatatcggacgtgatgattgt
atttcatttattgagcgtgaacaatggaaatatggtgaaggccgttttccttctcttctt
catttcttattattaaatccgagcttaaaaccttttcaagtgaaaaaggtaaatgagcgt
attgattttattaaatttattaaagaattagaaccgaaaaaagcattaaaagaaatcatt
catggtaaaggaaaatatttagagtacttacaaagtaacgatcgttcttcctttacgatg
cataaagacatacaagaagaaatgttggaagaattaatggagtctgcaactcgtttcacc
gatattccagcttatttacaatttattgacgaagcgattcaaggtcaaaaagaaatggaa
gcattaaaaacaatgccgcaaaaagatgccgtttcacttatgtcaattcataacgcaaaa
ggccttgaatttccatgtgtctttttacttggagcgagtgatgggatcctgccgcatact
tcttctttaaaagatgcaaatgatcgtgttacggaaacttctgaagcattagaagaagaa
cgccgattactttatgtcgccattacacgtgcgaaagaagaactttacatttcttctccg
caatttttcagaggaaagaaattagatatatctcgttttttatatactgtgcgaaaagat
ttacctgaaaagacatccactaaataa
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