Bacillus thuringiensis Bt407: BTB_c55410
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Entry
BTB_c55410 CDS
T02277
Symbol
rpoE
Name
(GenBank) putative DNA-directed RNA polymerase subunit delta
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
btg
Bacillus thuringiensis Bt407
Pathway
btg03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
btg00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BTB_c55410 (rpoE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
btg03021
]
BTB_c55410 (rpoE)
03400 DNA repair and recombination proteins [BR:
btg03400
]
BTB_c55410 (rpoE)
Transcription machinery [BR:
btg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BTB_c55410 (rpoE)
DNA repair and recombination proteins [BR:
btg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BTB_c55410 (rpoE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARE-HTH
DUF4777
ColG_sub
GDH2_N
HTH_Crp_2
2Fe-2S_thioredx
Sigma70_r4
PPP4R2
Pox_EPC_I2-L1
Motif
Other DBs
NCBI-ProteinID:
AFV21191
LinkDB
All DBs
Position
complement(5334865..5335404)
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AA seq
179 aa
AA seq
DB search
MNFKQYSPEELKECSMIEVVHSVLGDKRQATTFNELVQEIAQVLGLSQEQVNAKLAQFYT
DLNIDGRFINLGENRWGLRSWYPYEQIDEEILPQPKPKKKRKVEEDGFDDYIEEDEDDFD
DADGNVDEEDDVEDLDKVLEDEDGDDDDLDDLEEDEDDDFAEEELEYDETEEEEEEEEL
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
gtgaattttaagcaatattcaccagaagagctaaaagaatgttcaatgattgaagttgta
catagcgttttaggggataaaagacaagcaacgacattcaacgagttggttcaagaaatc
gctcaagtgctgggactatctcaagagcaagttaatgcgaaactcgcacaattttataca
gacttaaacatcgatggacgtttcattaatttaggagaaaatcgttggggactacgcagc
tggtacccatatgagcaaattgatgaagaaatcttaccgcagccaaaaccgaagaagaaa
cgtaaagttgaagaagacggttttgacgactacattgaagaagatgaagatgactttgac
gatgcagacggaaatgtagacgaagaagatgatgtagaagatttggacaaggttcttgaa
gatgaagacggagatgacgacgatcttgatgatttagaagaggatgaagacgacgacttc
gctgaagaagaacttgagtatgatgaaactgaagaagaagaagaagaggaagaactgtag
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