Bacteroides thetaiotaomicron VPI-5482: BT_1238
Help
Entry
BT_1238 CDS
T00122
Name
(GenBank) putative RNA binding protein with S1 RNA-binding domain
KO
K06959
protein Tex
Organism
bth
Bacteroides thetaiotaomicron VPI-5482
Brite
KEGG Orthology (KO) [BR:
bth00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
BT_1238
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_YqgF
Tex_central_region
HHH_3
HHH_9
Tex_N
S1
HHH_7
YqgF
T2SSK
S1_RRP5
HHH_6
Spt6_S1
ATP-synt_ab_C
HHH_5
HHH_2
Motif
Other DBs
NCBI-ProteinID:
AAO76345
UniProt:
Q8A8C9
LinkDB
All DBs
Position
1540987..1543161
Genome browser
AA seq
724 aa
AA seq
DB search
MCIFVAHSFAKKLFMELFHQMISGLLGIPERQISSTLHLLDEGATIPFISRYRKEATGGL
DEVQIENIKEQHDKLCDIAKRKETILSTINEQGKLTPELEKRINATWNPTELEDIYLPYK
PKRKTRAEAARQKGLEPLAMIMMLQREPNLTAKAATFVKGDVKDAEDALKGARDIIAEQV
NEDECARNAIRNQFTRQAEITAKVVKGKEEEAAKYRDYFDFSESLKRCTSHRLLAIRRAE
SEGLLKVSISPDDEACLERLDRQFVHGNNECSHQVKEATADAYKRLLKPSIETEFAAQSK
EKADDEAIRVFTENLRQLLLSPPLGQKRVLAIDPGFRTGCKVVCLDAQGNLLHNENIYPH
PPVNKTGEAASKLRKMIEAYEIEAISIGNGTASRETEDFINHQTFDRQIPVFVVSEQGAS
IYSASKIARDEFPDYDVTVRGAVSIGRRLMDPLAELVKIDPKSIGVGQYQHDVDQTKLKK
ALDQTVENCVNLVGVNLNTASSHLLTYISGLGPQLAQNIVNFRAENGAFSSRKELMKVPR
MGAKAFEQCAGFLRIPEAKNPLDNTAVHPESYHIVEQMAKDLKCSVDELIANKELRQKIK
ISDYITPTVGLPTLQDIMQELDKPGRDPRKAIKVFEFDKNVRTIADLREGMILPGIVGNI
TNFGAFVDIGIKENGLVHLSQLAERYISDPTEIVSIHQHVMVRVMNVDTDRKRIQLSMIG
VQQD
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgtgtatttttgtcgctcattcattcgcaaaaaaattgtttatggaactatttcaccaa
atgatttccggattactggggataccggaaagacaaatcagcagtaccctccacttgttg
gacgaaggtgccaccatccctttcatcagccgttaccgtaaggaagctaccggcggactg
gacgaagtacagatagagaacatcaaggagcaacatgacaagttgtgcgacatagccaaa
cggaaggaaaccatcctcagtaccatcaacgagcaagggaaactcactccggagctcgaa
aagcgcatcaacgccacctggaatcctacggaactggaggacatctacctcccctacaaa
cccaaacggaagacccgtgccgaagcggcccgccagaaaggattggaaccgctggccatg
atcatgatgctgcaaagggagcccaacctcaccgccaaagccgccaccttcgtcaaaggc
gacgtcaaggatgcggaagacgcactgaaaggcgcccgtgacatcatcgcagagcaagtg
aacgaggacgagtgtgcccgcaacgccatacgtaaccagttcacccgtcaggcggaaatc
accgccaaggtagtgaaaggaaaagaggaagaggccgccaagtaccgggattatttcgac
ttctccgaatcgctgaaacgctgcacttcccatcgcctgctcgccatccgccgggcagaa
tccgaagggttgctgaaagtatccatcagtccggatgacgaagcctgtctggaacgcctc
gaccgccagttcgtacatggcaataatgaatgcagccatcaggtaaaggaagccactgcc
gacgcatataaacgtctgctcaaaccttccatcgaaacagaatttgccgcccagtccaaa
gaaaaagccgacgacgaagctatccgcgtatttacggagaatctccgccagttgcttctc
tctcctcctctcggacagaaacgggtgctcgccatcgaccccggattccgtaccggctgc
aaagtcgtctgcctcgatgcgcaaggcaacttgctgcacaatgagaatatctacccgcat
cctccggtcaataaaaccggtgaagcggcctccaaactccgcaagatgatagaagcctat
gaaattgaagccatctccatcggcaacggaacagccagccgcgaaacggaagactttatt
aatcatcagaccttcgaccggcagattcctgtattcgtggtcagcgagcagggcgcttcc
atttattcggcatccaagatcgcccgtgacgagtttcccgattatgacgtaacggtacgt
ggagcagtctccatcggtcgccgactgatggaccctctggcggaactggtaaagatcgac
cccaaatctatcggtgtgggacaataccagcacgatgtagaccagacgaaactgaagaaa
gcccttgaccagacagtggaaaactgcgtgaacctggtaggcgtgaatctgaataccgcc
agcagtcatctgctgacatacatatccggtctggggccgcaactggcacaaaacattgtc
aacttccgtgccgagaacggagctttcagttcacgcaaggagctgatgaaagtcccccgc
atgggtgccaaagccttcgaacagtgtgccggcttcctccgcattcccgaagcaaagaac
ccattggacaacactgccgtgcatccggaaagctaccacatcgtagagcaaatggcaaaa
gatttgaaatgtagcgtagacgaactgatcgcgaataaggaactccgccaaaaaatcaag
atatcggactacatcacgccgactgtgggcctgcctaccctgcaagacatcatgcaggaa
ctcgacaagccgggtcgcgacccgcgtaaagcgatcaaggtatttgaattcgacaagaac
gtgcgcaccatcgcagacttgcgcgaaggcatgattctgccgggcatcgtaggcaatatt
acaaatttcggagctttcgtcgatataggcatcaaggagaacgggcttgtacacctctcc
caactggccgaacgatacatctccgatcctacagaaatcgtgtccatccaccagcatgtc
atggtcagagtgatgaacgtggataccgaccggaaacggattcagcttagcatgatcggg
gtacagcaagactga
DBGET
integrated database retrieval system
