Bacteroides thetaiotaomicron VPI-5482: BT_2169
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Entry
BT_2169 CDS
T00122
Name
(GenBank) RNA polymerase ECF-type sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
bth
Bacteroides thetaiotaomicron VPI-5482
Pathway
bth02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
bth00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BT_2169
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bth03021
]
BT_2169
Transcription machinery [BR:
bth03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BT_2169
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
Sigma70_r2
HTH_Tnp_ISL3
HTH_23
KORA
HTH_10
GerE
HTH_20
HTH_24
HTH_1
Motif
Other DBs
NCBI-ProteinID:
AAO77276
UniProt:
Q8A5R9
LinkDB
All DBs
Position
2729184..2729732
Genome browser
AA seq
182 aa
AA seq
DB search
MTESEVRKLLRQMKELDSQTAFRDFYNMTYDRLFRIAYYYVKQEEWSQEIVLDIFLKLWK
QRDTLLDVKNIEDYCFILVKNASLNYLEKESKYTTIHSDSLPEPQEQSYSPEESLISEEL
FAIYVKALDRLPERCREIFIRIREEKQSYAQVAEELDISIKTVDAQLQKAVSRLKEMISS
SG
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaatcagaagtaaggaagttattacggcaaatgaaggaactggactcgcaaaca
gccttccgcgacttctataacatgacttacgaccgactcttccgcatagcctactattat
gtgaaacaggaagaatggtcgcaggaaatcgtactcgacatcttcctcaaactctggaag
cagcgcgacactcttcttgatgtgaaaaacatcgaggactattgctttattctggtcaag
aacgcttctctcaattatctggaaaaagagtcgaagtacaccaccattcattccgattcc
ctgccggagccacaggaacaaagttattctccggaagagtcattaatcagtgaagaactg
tttgcaatctatgtgaaagcactcgaccggcttccggaacgttgccgggaaatattcatc
cgtatccgtgaagaaaaacaaagttatgcccaagtagcagaagaattggatatcagcata
aagacagttgatgcccagctacagaaagctgtctcccgactgaaagagatgatttcgtcc
agcggataa
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integrated database retrieval system
