Bacteroides thetaiotaomicron VPI-5482: BT_2230
Help
Entry
BT_2230 CDS
T00122
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
bth
Bacteroides thetaiotaomicron VPI-5482
Pathway
bth03030
DNA replication
bth03430
Mismatch repair
bth03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bth00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BT_2230
03430 Mismatch repair
BT_2230
03440 Homologous recombination
BT_2230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bth03032
]
BT_2230
03400 DNA repair and recombination proteins [BR:
bth03400
]
BT_2230
Enzymes [BR:
bth01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BT_2230
DNA replication proteins [BR:
bth03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BT_2230
DNA repair and recombination proteins [BR:
bth03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BT_2230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HHH_3
DUF6282
SSSPR-51
Motif
Other DBs
NCBI-ProteinID:
AAO77337
UniProt:
Q8A5K9
LinkDB
All DBs
Position
complement(2797309..2801112)
Genome browser
AA seq
1267 aa
AA seq
DB search
MQDFVHLHVHTQYSLLDGQASVARLVDKAMKNGMKGIAVTDHGNMFGIKEFTNYVNKKNS
GPKGEIKDLKKRIAGIEAGTVECEDKEAEVAACKAKIVEAENKLFKPIIGCEMYVARRTM
DLKEGKPDQSGYHLIVLAKNEKGYHNLIKLVSHAWTRGYYMRPRTDRSELEKYHEGLIVC
SACLGGEVPKRITAGQFAEAEEAIQWYKNLFGDDYYLEMQRHKATVPRANHECYPLQVNV
NKYLQEYARKYNIKLICTNDVHFVDEENAEAHDRLICLSTGKDLDDPSRMLYTKQEWMKT
REEMNELFADVPEALSNTLEILDKVEYYSIDHAPIMPTFAIPEDFGTEEGYRAKYTEKDL
FDEFTQDENGNVVLSEEEGQAKIKRLGGYEKLYRIKLEGDYLAKLAFDGAKRIYGDPLSE
EVKERLNFELYIMKTMGFPGYFLIVQDFINAARSELGVSVGPGRGSAAGSAVAYCLGITK
IDPIQYDLLFERFLNPDRISLPDIDVDFDDDGRGEVLRWVTNKYGQEKVAHIITYGTMAT
KLAIKDVARVQKLPLSESDRLAKLVPDKIPDKKLNLRNAIEYVPELQAAEASSDPLVRDT
LKYAKMLEGNVRGTGVHACGTIICRDDITDWVPVSTADDKETGEKMLVTQYEGSVIEDTG
LIKMDFLGLKTLSIIKEAVENIRLSRSLEIDVDQIDITDPATYKLYSDGRTIGTFQFESA
GMQKYLRELQPSTFEDLIAMNALYRPGPMDYIPDFIDRKHGRKPIEYDIPVMEKYLKDTY
GITVYQEQVMLLSRLLADFTRGESDALRKAMGKKLRDKLDHMKPKFIEGGRKNGHDPKVL
EKIWTDWEKFASYAFNKSHATCYSWVAYQTAYLKANYPSEYMAAVMSRSLSNITDITKLM
DECKAMGIQTLGPDVNESNLKFTVNHDGNIRFGLGAVKGVGEAAVQSIVEERNTNGPFKG
IFDFVQRVNLNACNKKNMECLALAGGFDSFPELKREQYFAVNSKGEVFLETLMRYGNRYQ
EDKRAAINSLFGGANVVDIATPEIPQGVERWGDLERLNKERDLVGIYLSAHPLDEFAIVL
DHVCNTRMADLEDKAALAGREITMGGIVTSVRRGVSKNGNPYGIAKIEDYSGSTEIPFWG
NDWVTYQGYLNEGTFLYIKARCQAKQWRQDELEVKITSMELLPDVKEELVQKITIIIPLS
VLNSGLITELATLTKEHPGNTELYFKVTDDTDSRMSVDLISRPVKLSVGRDLITYLKERP
ELGFRIN
NT seq
3804 nt
NT seq
+upstream
nt +downstream
nt
atgcaggatttcgttcatttacacgttcatacgcaatattctctactggatggtcaggca
agtgtcgcccgtctggtagataaagccatgaaaaatgggatgaagggtattgccgtgacc
gatcatggaaatatgttcggcatcaaggaatttacgaactatgtcaataagaagaatagc
ggtccgaaaggggaaattaaggatctgaaaaagcggattgcagggattgaagccggcaca
gtggagtgtgaggataaggaggcggaggtagctgcctgcaaggcgaagatcgtggaggcg
gagaacaagctctttaaaccgattatcggttgtgagatgtacgtcgcccgccgtacgatg
gacttgaaagaagggaagccggaccaaagcggttatcacttgattgtacttgccaagaat
gagaaaggttatcataaccttattaaattagtatcgcacgcgtggacgcgcgggtactat
atgcgtccgcgtaccgaccgcagtgagctggagaagtatcacgaaggtctgattgtctgc
tcggcgtgtctgggtggcgaggtgccgaagcgtattaccgcagggcagtttgccgaagcc
gaagaagcgatccaatggtataagaacctgtttggtgatgactactatctggaaatgcag
cgccataaggcgactgtaccccgtgccaatcacgaatgttatccgctacaggtaaatgtg
aacaaatacttgcaggagtatgcccggaagtataatatcaagctgatctgcaccaatgac
gtccactttgtggatgaagagaatgccgaggcacacgaccgtttgatctgcctgagtacg
ggtaaagacttggatgaccccagccgtatgctatataccaaacaggaatggatgaagacc
cgtgaagagatgaatgaactctttgcagatgttcccgaggcactgagcaatacgctggaa
attctagataaagtcgaatattattcgattgaccatgcacctatcatgcctaccttcgct
attcctgaagacttcggaacagaagaaggatatcgtgccaaatatacggagaaagacctg
ttcgatgagtttacacaggacgaaaatggtaatgtggtgctgagcgaagaggaaggacaa
gccaagatcaaacgtttggggggatatgagaaactgtatcgtatcaaacttgaaggcgac
tatctggcaaagttagcatttgacggtgcgaaaagaatatatggcgaccctttgtcggaa
gaagtgaaagaacggctcaacttcgagttgtacatcatgaaaacgatgggtttccccgga
tacttcttgatagtgcaggactttatcaatgccgcacgctcggaactgggcgtatcggta
ggccccggacgtggttcggctgccggttcggcagtggcttactgtctgggtatcaccaag
atcgaccctatccaatacgacttgctgttcgagcgtttcttgaatccggaccgtatttcg
ttgcccgatatcgatgtggacttcgatgacgacggtcgtggtgaagtgcttcgctgggta
accaataaatatggtcaggaaaaagtagcgcatatcatcacgtatggtacgatggctacc
aaactggctatcaaagacgttgcccgtgtacagaaacttcctctctcggagtccgaccgt
ctggcaaagctggtgccggataaaatccccgacaagaagctgaacctgcggaatgccatc
gaatacgtccccgaactgcaagcggctgaggcatcgtccgacccgttggtgcgagacact
cttaagtatgccaaaatgcttgaaggtaatgttcgtggtaccggtgtgcatgcctgcggt
acgattatctgtcgtgacgacatcaccgactgggtgcctgtaagtacagccgacgataag
gaaacgggcgaaaagatgctcgttacccagtatgaaggttcggtgatcgaggataccgga
ttgatcaagatggacttcctcgggttgaaaacattgtctattattaaggaggcagttgag
aatatccgtctgagtcgtagtctggagatagacgtagaccagatcgatattaccgatccg
gcaacttacaaattatatagtgacggacgtaccatcggaacgttccagtttgaatctgcc
ggaatgcagaagtacctgcgcgaattgcagccttctaccttcgaagatttgatcgccatg
aatgccctctatcgtccgggtccgatggattatattccggacttcatcgaccgtaagcat
ggtcgtaagccgattgaatatgacattccggtgatggagaaatatctgaaagatacgtat
ggcattacggtctatcaggaacaggtgatgcttttgtcacgtctgctggcggattttacc
cgtggtgagtccgatgcccttcgtaaagcgatgggtaagaagctgcgtgataagctggat
cacatgaagcctaagtttatcgaaggcggacgcaagaacgggcatgacccgaaagtactt
gaaaagatttggaccgactgggaaaagtttgcctcttatgcgttcaacaaatcgcacgct
acttgctactcatgggtagcttatcagacagcctatctgaaagcgaactacccgtcggaa
tacatggcggctgtcatgagccgaagtttgtccaacattaccgatatcacgaagctgatg
gacgaatgcaaggcaatgggtatccagacgctcggtccggatgtgaatgagagtaacctg
aagtttacggtcaaccacgatggtaatatccgtttcggactgggagcggtgaaaggcgta
ggcgaagctgccgtgcaaagcattgtagaagaacgtaataccaacggaccattcaaaggt
atctttgatttcgtacaacgtgtcaatctgaatgcctgcaataaaaagaatatggaatgt
ctggcgttggcgggaggtttcgacagtttccccgaattgaagcgggagcagtactttgcc
gtcaactctaagggcgaagtattcctcgaaaccttaatgcgatacggtaaccgctatcag
gaagacaaaagagctgccatcaattcattgttcggcggagcgaatgtcgtcgatatcgcc
actcccgaaattcctcagggagtagagcgctggggcgacctcgaacgtctgaacaaggaa
cgcgacctggtaggtatctacctttccgcccatccgctggatgagttcgcgattgtgctg
gatcacgtctgcaatacccgtatggcagatttggaagataaggcggctttggcaggccgg
gagattacaatgggtggcattgtgaccagtgtccgtcgtggagtcagcaagaatggcaat
ccgtatggcattgccaagatcgaagattattcgggctctacggaaatacctttctgggga
aatgactgggtgacttatcagggatatctgaatgaaggcacgttcctgtatatcaaagcc
cgttgtcaggccaagcaatggcggcaggacgaactggaagtcaagatcacttcaatggaa
cttctgcccgatgtgaaagaagaactggtgcagaagatcaccattatcattcctctgtca
gtgttaaattcgggacttattaccgagctggccactttgaccaaagaacatcccggcaat
acggaactctacttcaaggtgacggatgatacggacagccgtatgtcggtcgatctgatt
tcccgtccggtcaagctttcggtaggcagagatttaataacatatttaaaggagcgcccc
gaacttggattccgtataaattga
DBGET
integrated database retrieval system
