Bacteroides thetaiotaomicron VPI-5482: BT_2406
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Entry
BT_2406 CDS
T00122
Name
(GenBank) putative DNA repair protein
KO
K04485
DNA repair protein RadA/Sms
Organism
bth
Bacteroides thetaiotaomicron VPI-5482
Brite
KEGG Orthology (KO) [BR:
bth00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bth03400
]
BT_2406
DNA repair and recombination proteins [BR:
bth03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
BT_2406
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_25
ATPase
Zn_ribbon_LapB
ChlI
DnaB_C
Lon_C
AAA_22
nSTAND3
DUF7125
AAA_16
AAA
AAA_14
nSTAND_NTPase5
DUF8455
Elong_Iki1
AAA_24
NTPase_1
AAA_5
AAA_29
DUF7129
NACHT
zf-RING_10
ABC_tran
Nitro_FeMo-Co
DZR
HypA
Zn_ribbon_8
Motif
Other DBs
NCBI-ProteinID:
AAO77513
UniProt:
Q8A538
LinkDB
All DBs
Position
3004235..3005602
Genome browser
AA seq
455 aa
AA seq
DB search
MAKEKTVYVCSNCGQESPKWVGKCPSCGEWNTYVEEIVRKETTNRRPVSGIETQKAKPVI
LSEIEADDEPRINMHDDELNRVLGGGLVPGSLVLIGGEPGIGKSTLVMQTVLRMPDKKIL
YVSGEESARQLKLRADRLSEVSSDCLIVCETSLEQIYVHIKNTSPDLVIIDSIQTISTEN
IESSPGSIAQVRECSASILRFAKETHTPVLLIGHINKEGSIAGPKVLEHIVDTVLQFEGD
QHYMYRILRSIKNRFGSTAELGIYEMRQDGLRQVSNPSELLLSQDHEGMSGVAIASAIEG
VRPFLIETQALVSSAVYGNPQRSATGFDIRRMNMLLAVLEKRVGFKLAQKDVFLNIAGGL
KVNDPAIDLAVISAILSSNMDAAVEPEVCMAGEIGLSGEIRPVNRIEQRIGEAEKLGFKR
FLLPKYNLQGIDTQKLKIELVPVRKVEEAFRALFG
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagaaaaaaccgtatatgtatgcagtaactgcggacaggaatcacccaaatgg
gtgggtaagtgtccgtcgtgcggagaatggaatacgtatgtagaagaaatcgtacggaaa
gaaacgaccaaccgccgtccggtatcgggcatcgagacgcagaaagcgaaacctgttatc
ctcagcgaaatagaagccgatgatgagccgcgcatcaatatgcacgacgacgaactgaat
cgtgtattgggcggaggacttgtgcccggctctctggttttgatcggcggcgaaccggga
atcggaaaatcgacactcgtcatgcagactgtcttgcgtatgccggacaagaagattctc
tatgtatccggtgaagagagcgcacgacagctgaaactacgcgccgaccgcctttcggaa
gtctccagcgactgtctgatcgtttgtgagacttcacttgaacagatttacgtgcatatc
aagaacaccagtcccgacctggtcattatcgactccatacagactatttccacagaaaat
atagaatcatctcccggaagcattgcccaggtaagggaatgttcggcatcgattctccgt
tttgccaaggaaacgcatacgccggtcctgctaatcggacatataaataaagaaggcagt
attgcaggcccaaaggtactggagcatattgtagatacagttctccagtttgaaggagac
cagcattatatgtaccgtattctgcgaagcatcaagaaccgattcggaagtactgccgaa
ctaggtatttacgaaatgcgtcaggacggattacgtcaggtcagcaatccttcggagttg
ctgttaagtcaggatcatgaagggatgagcggagtagcgattgcttctgctatcgaggga
gtacgcccgttcctgattgagacacaggctttggtaagttctgccgtctatggaaatcct
caacggtcggcaaccggctttgatatacggagaatgaatatgcttctggctgtcctcgaa
aagcgcgtaggcttcaagcttgcgcagaaagatgtgtttctgaatattgccggaggattg
aaggtgaatgatccggctattgacctggcagtgatcagtgccatcctttcttccaatatg
gatgcggctgtcgaaccggaagtctgtatggcaggagaaatcggtctgtcgggagagata
cgccccgtgaatcgaatagagcagcgaatcggagaagcggaaaagttaggattcaaacgg
ttcctgcttcctaagtataatctgcaagggattgacacccaaaaactaaaaatagaatta
gtacctgtaagaaaggtagaagaggcattcagagcactcttcggataa
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