Bacteroides thetaiotaomicron VPI-5482: BT_2733
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Entry
BT_2733 CDS
T00122
Name
(GenBank) DNA-directed RNA polymerase beta' chain
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
bth
Bacteroides thetaiotaomicron VPI-5482
Pathway
bth03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bth00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BT_2733
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bth03021
]
BT_2733
03400 DNA repair and recombination proteins [BR:
bth03400
]
BT_2733
Enzymes [BR:
bth01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BT_2733
Transcription machinery [BR:
bth03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BT_2733
DNA repair and recombination proteins [BR:
bth03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BT_2733
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
Apocytochr_F_C
Peptidase_M23
BSH_RND
Motif
Other DBs
NCBI-ProteinID:
AAO77839
UniProt:
Q8A470
LinkDB
All DBs
Position
complement(3382547..3386830)
Genome browser
AA seq
1427 aa
AA seq
DB search
MAFRKENKTKSNFSKISIGLASPEEILENSSGEVLKPETINYRTYKPERDGLFCERIFGP
IKDYECHCGKYKRIRYKGIVCDRCGVEVTEKKVRRERMGHIQLVVPVAHIWYFRSLPNKI
GYLLGLPTKKLDSIIYYERYVVIQPGVKAEDGIAEYDLLSEEEYLDILDTLPKDNQYLED
NDPNKFIAKMGAEAIYDLLARLDLDALSYELRHRAGNDASQQRKNEALKRLQVVESFRAS
RGRNKPEWMIVRIVPVIPPELRPLVPLDGGRFATSDLNDLYRRVIIRNNRLKRLIEIKAP
EVILRNEKRMLQESVDSLFDNSRKSSAVKTDANRPLKSLSDSLKGKQGRFRQNLLGKRVD
YSARSVIVVGPELKMGECGIPKLMAAELYKPFIIRKLIERGIVKTVKSAKKIVDRKEAVI
WDILEHVMKGHPVLLNRAPTLHRLGIQAFQPKMIEGKAIQLHPLACTAFNADFDGDQMAV
HLPLSNEAILEAQMLMLQSHNILNPANGAPITVPAQDMVLGLYYITKLRAGAKGEGLTFY
GPEEALIAYNEGKVDIHAPVKVIVKDVDENGNIVDVMRETSVGRVIVNEIVPPEAGYINT
IISKKSLRDIISDVIKVCGVAKAADFLDGIKNLGYQMAFKGGLSFNLGDIIIPKEKETLV
QKGYDEVEQVVNNYNMGFITNNERYNQVIDIWTHVNSELSNILMKTISSDDQGFNSVYMM
LDSGARGSKEQIRQLSGMRGLMAKLQKAGAEGGQIIENPILSNFKEGLSVLEYFISTHGA
RKGLADTALKTADAGYLTRRLVDVSHDVIITEEDCGTLRGLVCTDLKNNDEVIATLYERI
LGRVSVHDIIHPTTGELLVAGGEEITEEVAKKIQDSPIESVEIRSVLTCEAKKGVCAKCY
GRNLATSRMVQKGEAVGVIAAQSIGEPGTQLTLRTFHAGGTAANIAANASIVAKNSARLE
FEELRTVDIVDEMGEAAKVVVGRLAEVRFVDVNTGIVLSTHNVPYGSTLYVSDGDLVEKG
KLIAKWDPFNAVIITEATGKIEFEGVIENVTYKVESDEATGLREIIIIESKDKTKVPSAH
ILTEDGDLIRTYNLPVGGHVIIENGQKVKAGEVIVKIPRAVGKAGDITGGLPRVTELFEA
RNPSNPAVVSEIDGEVTMGKIKRGNREIIVTSKTGEVKKYLVALSKQILVQENDYVRAGT
PLSDGATTPADILAIKGPTAVQEYIVNEVQDVYRLQGVKINDKHFEIIVRQMMRKVQIDE
PGDTRFLEQQVVDKLEFMEENDRIWGKKVVVDAGDSQNMQPGQIVTARKLRDENSMLKRR
DLKPVEVRDAVAATSTQILQGITRAALQTSSFMSAASFQETTKVLNEAAINGKTDKLEGM
KENVICGHLIPAGTGQREFEKIIVGSKEEYDRILANKKTVLDYNEVE
NT seq
4284 nt
NT seq
+upstream
nt +downstream
nt
atggcttttagaaaagaaaataagacgaaaagcaatttctcgaagatctcaattggtctg
gcttctccggaagaaatcctagagaattcgagtggtgaagttttgaagcctgaaaccata
aattaccgtacgtacaaacccgaacgcgatggtttgttctgcgagcgcatttttggtcct
attaaggattacgaatgccattgcggtaaatataagcgtatccgttataaaggtatcgtc
tgcgaccgttgtggtgtagaagttacagaaaagaaagtacgccgtgaacgtatgggacat
atacagttggtggtgccggtggcacacatctggtatttccgttcgcttccaaataagatc
ggttatttgctcggactgccgacaaagaagctggattcgattatatattacgaacgttat
gttgttattcagccgggtgtaaaggctgaagatggcattgccgaatatgatttactttct
gaagaagaatatctggatattctggatacacttccgaaggacaatcaatatctggaggat
aatgatccgaataagttcatcgctaagatgggagctgaagcaatctatgatttgctggct
cgtttggatctggatgctctgtcttatgaattgcgtcaccgtgcaggcaatgatgcttca
cagcaacgtaagaatgaggcattgaaacgtctgcaggttgtagaatcgttccgtgcatca
cgtggacgtaacaagccggaatggatgattgtacgtatcgtaccggttattccgcccgaa
ctccgtccattggttccattggatggtggtcgttttgctacttctgacttgaatgacctt
tatcgtcgtgttatcattcgtaacaaccgtctgaagagattgatcgaaatcaaagctccg
gaagtaatcttgcgtaatgagaaacgtatgcttcaggaatctgtagactcattgttcgat
aattcacgtaaatcaagtgcagtgaagacggatgctaaccgtccgttgaaatcactgtct
gatagcttgaaaggtaaacaaggacgtttccgtcagaacttgttgggtaaacgtgttgac
tactctgcacgttcggtaattgtcgttggtccggaactgaagatgggtgagtgcggtatt
cctaaattgatggctgccgaactttataagccgtttattatccgtaagctcattgaacgt
ggtatcgttaagacggtgaaatctgcaaagaagattgtagatcgtaaggaagcggtgatc
tgggatattctggaacacgtaatgaaaggacatcctgtactgttgaaccgtgctccgaca
ttgcaccgtttgggtatccaggcattccagccgaagatgatcgaaggtaaagctatccag
ttgcacccgttggcatgtacggcattcaacgccgacttcgacggtgaccagatggctgtt
cacttgcctttgagtaacgaagcaattcttgaagctcagatgttgatgcttcagtcacat
aatatcctgaatccggcaaatggtgcgcctattactgtgcctgcacaggatatggttctt
ggtttgtattacattaccaagttgcgtgctggtgctaagggagaaggacttacattctac
ggaccggaagaagcattaatcgcttataatgaaggtaaggtagatattcatgctccggta
aaggtgatcgtgaaagacgttgatgaaaatggtaacattgttgacgttatgcgtgaaact
tctgtaggacgtgtgattgttaatgaaattgttcctcctgaagcaggttatatcaatacg
attatttctaagaaatctcttcgtgatatcattagtgatgtaatcaaggtttgtggtgtg
gctaaagctgcagacttcttggatggaatcaagaacttaggttaccaaatggcctttaag
ggtggtttgtcattcaacttgggtgatattattatcccgaaagaaaaagagacattggta
caaaaaggttacgacgaagttgaacaagtcgtaaacaactataatatgggtttcattacc
aacaacgaacgttataatcaggtaattgatatctggacacatgtgaactctgagttgtct
aacatcttgatgaaaactatttcttcggatgaccaaggatttaactctgtatacatgatg
ctggattcgggtgcccgtggttctaaagaacagattcgtcagttgtccggtatgcgtggt
ttgatggctaagctccagaaagctggtgctgaaggtggtcagattattgaaaacccgatc
ttgtcaaactttaaagagggactttctgtgttggagtactttatctctactcacggtgcc
cgtaaaggtttggcggataccgctttgaagactgccgatgccggatatttgactcgtcgt
ctggtagacgtttctcacgacgtgatcatcacggaagaagactgcggtacacttcgtgga
ttggtttgtacagacttgaagaataacgatgaagtaatcgctaccctgtatgaacgcatc
ttaggtcgtgtttctgtacatgatattattcatcctactacaggcgaattgcttgttgcc
ggtggtgaagaaatcacagaagaagttgctaagaagattcaggattctccgattgaaagc
gttgaaatccgttctgtattgacttgtgaagcgaagaagggtgtttgtgctaagtgttac
ggacgtaacctggcaacaagccgcatggttcagaagggtgaggctgtcggtgtaattgct
gctcagtcaatcggtgagccgggtacacagttgacattgcgtacattccacgctggtggt
actgctgcgaatattgcggcaaatgcaagtattgtggctaagaacagtgctcgtctggaa
tttgaagaacttcgtacggtagatatcgtagacgaaatgggtgaagctgcaaaagtagtg
gtaggccgtttggctgaagttcgttttgtggacgtaaatactggtatcgttctttctacg
cacaatgtaccttatggttctacattatatgtatcggatggtgatctggttgaaaagggt
aagttaattgctaaatgggacccgttcaatgccgttattataactgaagcaactggtaag
attgaattcgaaggtgtaattgagaatgttacctataaagtggaatcggatgaagcaacc
ggtcttcgtgaaatcatcattattgaatctaaggataaaacgaaagttccttcggctcat
atcctgacagaagacggtgatctgattcgtacttataacttaccggtaggtggtcacgtg
attattgaaaatggtcagaaagtgaaagccggtgaagtaatcgtgaagattccgcgtgct
gtaggtaaggcgggtgacatcacgggtggtcttcctcgtgttactgagttgtttgaagca
cgtaatccgtctaatcctgctgtcgtttctgaaattgacggtgaggttacaatgggtaag
atcaagcgtggtaaccgtgaaatcatcgtaacttcgaaaacaggtgaagtgaagaagtat
cttgttgcattgtccaaacagattctggttcaggagaacgactatgtgcgtgctggtact
ccattatctgacggtgctactactccggctgatatcctggcaattaaaggtcctacggct
gtacaggaatatattgtgaatgaagttcaggatgtataccgtctgcagggtgtgaagatc
aatgataagcattttgagattatcgttcgccagatgatgcgtaaggttcagatcgatgag
ccgggtgatactcgcttcttggaacaacaggtagtggataagcttgagtttatggaggaa
aacgatcgtatctggggtaagaaagtggttgttgatgcaggtgattctcagaatatgcag
ccgggacagattgtgactgcccgtaagttgcgtgatgagaacagtatgctgaagcgccgt
gacttgaaacctgttgaggtacgtgatgctgtagctgcaacttctactcagattcttcag
ggtattacgcgtgctgcactgcagacttcaagctttatgtcagctgcatccttccaggaa
acaacgaaggtgttgaatgaggctgctatcaatggcaagacagataaacttgaaggaatg
aaggaaaacgtaatttgcggtcacttaattccggcaggtacaggtcagcgtgaatttgaa
aagattatcgttggttcaaaagaagagtatgatcgtatcttggcgaacaagaagacagta
cttgattacaatgaagtagaataa
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