Bacteroides thetaiotaomicron VPI-5482: BT_3010
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Entry
BT_3010 CDS
T00122
Name
(GenBank) RNA polymerase ECF-type sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
bth
Bacteroides thetaiotaomicron VPI-5482
Pathway
bth02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
bth00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BT_3010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bth03021
]
BT_3010
Transcription machinery [BR:
bth03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BT_3010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
Sigma70_r2
GerE
HTH_23
HTH_24
Sigma70_ECF
DUF6273
HTH_Mga
HTH_AsnC-type
HTH_11
HTH_10
HTH_5
HTH_38
HTH_28
HTH_20
UPF0122
HTH_Tnp_ISL3
HTH_40
HTH_DeoR
TnsD
HTH_17
HTH_Tnp_1_2
DDE_3
HTH_36
Motif
Other DBs
NCBI-ProteinID:
AAO78116
UniProt:
Q8A3E4
LinkDB
All DBs
Position
complement(3801071..3801646)
Genome browser
AA seq
191 aa
AA seq
DB search
MNERERVLAIKGGDHQAFIDLYNEYWSQVYDFSRLYIATIADAEEIVQDVFVKLWESRHL
LKEDENIKGFLFIVTRNIVFNKNKKRVNENLFKTSVLVAYGNEGYYNSTTVEEDYCASQL
KIFIDRLINSLPEQQRKCFLLSREESLSYKEIAERLGISQKTVEIHMGKALKFLKDKVKR
GWEILLSLLSF
NT seq
576 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaaagagaaagagtattggctattaagggcggtgatcatcaagcgtttatagat
ttgtataacgagtattggagtcaggtttatgactttagccgattgtacatcgctacaatt
gctgatgcagaggaaattgttcaggatgtgtttgtgaagttgtgggaatcaaggcattta
ctgaaggaagatgaaaatatcaaaggttttctctttattgttacccgaaacatcgtattt
aataaaaataagaagagagtaaatgagaatcttttcaaaacctctgttttggtagcctat
ggaaacgaaggttattataactccactactgtggaggaagattattgcgcttctcaacta
aaaatattcattgatcggttaatcaattcacttcctgaacaacaaagaaagtgtttcttg
ttgagccgtgaagaaagcctgagttacaaggagatagccgagaggcttggtattagtcag
aagactgtagaaatacatatgggtaaggccttgaaattcttgaaagataaggtgaagcga
ggctgggagattctattgtcgcttctttcattttag
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