Bacteroides thetaiotaomicron VPI-5482: BT_3260
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Entry
BT_3260 CDS
T00122
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
bth
Bacteroides thetaiotaomicron VPI-5482
Pathway
bth03030
DNA replication
bth03410
Base excision repair
bth03420
Nucleotide excision repair
bth03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bth00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BT_3260
03410 Base excision repair
BT_3260
03420 Nucleotide excision repair
BT_3260
03440 Homologous recombination
BT_3260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bth03032
]
BT_3260
03400 DNA repair and recombination proteins [BR:
bth03400
]
BT_3260
Enzymes [BR:
bth01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BT_3260
DNA replication proteins [BR:
bth03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
BT_3260
DNA repair and recombination proteins [BR:
bth03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
BT_3260
NER (nucleotide excision repair)
GGR (global genome repair) factors
BT_3260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_2
DNA_pol_lambd_f
HHH_5
DUF2972
HHH
Motif
Other DBs
NCBI-ProteinID:
AAO78366
UniProt:
Q8A2P5
LinkDB
All DBs
Position
complement(4162078..4164927)
Genome browser
AA seq
949 aa
AA seq
DB search
MESDNKLFLLDAYALIYRAYYAFIKNPRINSKGFNTSAILGFVNTLEEVLKKENPSHIGV
AFDPSGPTFRHEAFEQYKAQREETPEAIRLSVPIIKDIIHAYRIPILEVAGYEADDVIGT
LATEAGRQGITTYMMTPDKDYGQLVTDNVFMYRPKHTGGFEVMGIEEVKAKFDIQSPAQV
IDMLGLMGDASDNIPGCPGVGEKTAQKLIAEFGSIENLLEHTDQLKGALKTKVETNKELI
TFSKFLATIKIDVPIQLEMDKLVREQADEDSLRQIFEELEFRTLIDRVLKKENSAGGVTM
ATGSKTATAKSAPSPLPLFPEEGGAIQGDLFANFTGNEAGEAKKSNLETLETLNCDYQLI
DTEKKRAEIIQKLLTSKILSLDTETTGTEPMDAELVGMSFSITENQAFYVPVPDNREEAL
KIVNEFRPVFENENSLKVGQNIKYDMIVLENYGVQVKGALFDTMIAHYVLQPELRHGMDY
LAEIYLHYQTIHIDELIGPKGKNQKNMRDLDPKDIYRYACEDADVTLKLKNVLEKELKEN
DAERLFYDIEMPLVPVLVNIERNGVLLDTEALKQSSVHFTAQMQRIEQEIYELAGETFNI
ASPKQVGEVLFDKLRIIEKAKKTKTGQYVTSEEVLESLRHKHPVVEKILEHRGLKKLLGT
YIDALPQLINPRTGRVHTSFNQTVTSTGRLSSSNPNLQNIPIRDENGKEIRKAFIPDEGC
LFFSADYSQIELRIMAHLSEDKNMIDAFLSNHDIHAATAAKIYKIDLKDVDSDMRRKAKT
ANFGIIYGISVFGLAERMNVDRKEAKELIDGYFETYPSVKAYMEKSIQIAQEKGYVETIF
HRKRFLPDINSRNAVVRGYAERNAINAPIQGSAADIIKVAMARIYQRFQTEGIQAKMILQ
VHDELNFSVPVNEKERVEEIVIEEMEHAYRMHVPLKADCGWGKNWLEAH
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atggagtcagacaataaattatttcttttagacgcttatgcactgatatatcgggcttat
tacgcctttatcaagaatcccagaatcaactccaaagggttcaatacttcagctatcctc
ggatttgtcaataccctcgaagaggtgctgaaaaaggagaatccgtcacatataggagta
gccttcgacccctccggccctaccttccgccacgaagctttcgagcaatacaaagcccag
cgtgaagaaactccggaagctatccgcctctccgtacctattataaaggatatcatccac
gcctaccgcatcccgattctggaagtggcaggatacgaagccgacgacgtgatcggaact
ctcgccactgaagccggacgtcagggcatcaccacctatatgatgactcccgacaaagac
tacggccagctggtgacagacaacgtattcatgtatcgccccaaacatacgggaggtttt
gaagtgatgggcatcgaagaagtgaaagcaaagttcgatatccagtcgcccgcacaagta
atcgatatgctcggactgatgggcgatgcctccgacaatatccctggttgtcccggtgtc
ggtgaaaagactgcccagaaactaatcgccgaattcggaagtatcgaaaatctgctggaa
cataccgaccaactgaaaggagccttgaaaacgaaagtggaaaccaataaggaattgatt
actttctccaaattccttgccactatcaaaatcgatgttcctatccaactcgaaatggac
aagctcgtccgcgaacaggcagacgaagattcactccgacaaatttttgaagaactggaa
ttccggacactgatcgaccgggtactgaaaaaagaaaattctgccggcggagtaacaatg
gcaaccggaagcaaaacggcaacggccaaaagtgctccctctcctcttccactttttccc
gaagaaggaggagccatacaaggcgatttatttgcgaattttacgggcaatgaggcaggc
gaagccaaaaaatcgaatctagagacgttagaaacgcttaattgcgactaccaactcatt
gatacagagaagaaaagagctgaaatcattcaaaagttacttacatcgaaaattctctcg
ttagatacggagactacaggaacggaaccaatggacgccgaactagtcggaatgagtttc
tctatcaccgaaaatcaggctttttatgtgccggtccccgacaatcgtgaggaagcatta
aaaatcgtcaacgaattccgtccggtcttcgaaaatgagaactcattgaaagtcggacaa
aatatcaagtacgacatgatcgttcttgaaaattacggagtgcaagtgaaaggtgcactc
tttgatacgatgatcgcccattacgttcttcaaccggaacttcgtcatggaatggactat
ctggcagaaatctatcttcactatcagaccatccacatcgacgaactgataggtccgaaa
gggaagaaccagaaaaacatgcgcgatctcgacccgaaggatatctaccgctatgcctgc
gaagatgcagacgtaacactaaagctcaaaaacgtcctggagaaagaactgaaagagaac
gatgccgaacgtttgttttatgatatcgaaatgccgcttgtacccgtattggttaatata
gaacggaatggggtattgctggatacggaagcgctcaaacaatcgtctgttcatttcacc
gctcagatgcaacgcatcgagcaggagatttatgaactggcaggcgaaaccttcaatatc
gcttcgcccaaacaagtaggcgaggtactgtttgacaaactaagaatcatcgaaaaagcg
aagaagaccaaaaccggtcagtacgtcacttcggaagaagtgctcgaaagccttcggcat
aaacatcccgtagtagaaaagattctggaacaccgcggactgaagaaactgctaggaact
tatatcgatgcacttccccaactgatcaacccgcgcacgggacgagtacacacgtctttc
aaccagaccgtcacctctaccggacgcctcagctccagtaacccgaatctgcagaatatt
cctatccgcgacgagaacggcaaggaaatccgcaaggcatttatccctgacgaaggctgc
ctgttcttctctgccgactattcgcagatagaacttcgtatcatggcacatctcagcgaa
gacaagaatatgatcgacgccttcctcagcaatcatgatatccacgcagctacagctgcc
aaaatatataagatcgacctgaaagacgtagactccgatatgcgacgcaaagcgaaaacc
gccaacttcggtatcatctacggcatctccgtatttggccttgcagagcgaatgaacgta
gaccggaaggaagccaaagaactgatcgacggctatttcgaaacttatccaagcgtgaaa
gcctatatggagaagagtatccagatagctcaggagaaagggtatgtagaaacgattttc
caccggaaacgcttcttgccggacattaactcacgaaacgccgttgtacgcggctatgcc
gagcgaaacgccatcaacgcaccgattcagggaagcgccgcagatatcataaaggtagca
atggcacgcatttatcagcgattccagacagaaggcatacaagctaaaatgatattgcaa
gtacacgatgaattgaacttcagcgtgcccgtcaacgaaaaagaacgtgtagaagagatc
gttattgaggaaatggaacacgcttaccgtatgcacgttcccttgaaagcagattgcggc
tggggcaagaactggctcgaagcacactaa
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