Bacteroides thetaiotaomicron VPI-5482: BT_3872
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Entry
BT_3872 CDS
T00122
Name
(GenBank) ribosomal large subunit pseudouridine synthase B
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
bth
Bacteroides thetaiotaomicron VPI-5482
Brite
KEGG Orthology (KO) [BR:
bth00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bth03009
]
BT_3872
Enzymes [BR:
bth01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
BT_3872
Ribosome biogenesis [BR:
bth03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
BT_3872
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
SYY_C-terminal
Motif
Other DBs
NCBI-ProteinID:
AAO78977
UniProt:
Q8A0Z9
LinkDB
All DBs
Position
5045139..5046629
Genome browser
AA seq
496 aa
AA seq
DB search
MSTENEEWRENSYNEENTGAGRDGNKSYNREGGERPYRPSYNREGGDRPYRPRFNPNSEG
GERPQRSYGERSYDRPQRPSYNREGGDRPYRPRFNSNNEGGERPQRPYNREGGEQRSYDR
PQRPSYNREGGDRPYRPRFNPNGEGGDRPQRPYNREGGEQRSYGDRPYRPRFNSGEGGDR
PQRPYNREGGDRPYRPRFNSGEGGGYRNNNGGGYRPRFNNDRSQGGYRPRPRTSDYDPNA
KYSIKKQIEYKEQFVDPNEPIRLNKFLANAGVCSRREADEFITAGVVSVNGEVVTELGTK
IKRSDVVKFHDEPVSIERKVYVLLNKPKDTVTTSDDPQERRTVMDLVKGACNERIYPVGR
LDRNTTGVLLLTNDGDLASKLTHPKFLKKKIYHVHLDKNLTKADMDQIAAGVQLEDGEIH
ADAISYTDDFKKDQVGIEIHSGKNRIVRRIFESLGYKVVKLDRVFFAGLTKKGLRRGDWR
YLSEAEVNYLRMGSFE
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgagcacagaaaacgaagaatggcgcgaaaattcttacaatgaggagaatacaggtgcc
ggccgtgatggtaacaagtcttacaacagagaaggtggagaacgtccgtatcgtccttct
tacaaccgtgaaggtggggatcgtccgtatcgcccgcgatttaatccgaatagtgaaggt
ggagagcgcccacagcgttcttatggtgaacgttcttatgatcgcccccaacgtccttct
tacaatcgtgaaggtggagaccgtccgtatcgtcctcgcttcaatagcaacaatgaagga
ggcgaacgtccgcaacgtccttacaaccgcgaaggtggtgaacaacgttcttatgatcgt
cctcaacgcccttcttacaaccgtgaaggtggagaccgtccgtatcgtccgagatttaat
ccgaacggcgaaggtggcgatcgtccgcagcgtccttacaatcgtgaaggtggcgagcaa
cgctcttatggcgaccgtccgtaccgtccccgttttaacagtggcgaaggtggcgaccgt
cctcagcgtccttataaccgcgaaggtggtgatcgtccatatcgtccccgcttcaacagt
ggtgaaggtggtggctaccgtaataacaacggtggtggctatcgtccgagatttaacaat
gaccgttcgcagggtggctatcgtccgcgtccgcgtaccagtgattacgatccgaatgct
aagtatagcatcaagaagcagattgagtacaaggaacagtttgttgatccgaacgaaccg
attcgtctgaataagttcttggctaatgccggtgtttgctcacgtcgcgaagctgatgag
tttatcacagcaggtgtggtttctgtaaacggtgaagtagtaactgaattgggtacaaag
atcaaacgctcggatgtggtgaagttccacgatgaaccggtaagcatcgaacgtaaggta
tacgtactgttgaataagccgaaagatacggttactacatcggatgatccgcaggaacgc
cgcacggtaatggatctggtaaaaggcgcttgcaacgaacgcatttatccggtagggcgt
cttgaccgcaacacgactggtgtacttctgttgacaaatgacggtgacctggcttccaag
ctgacacacccgaaattcttgaaaaagaaaatatatcatgttcatctggacaagaacctg
acaaaagcagatatggatcagattgcagccggcgtacagttggaagacggtgaaatccat
gcagatgctatcagctacacagatgatttcaagaaagaccaggtaggtatcgagattcac
tccggcaagaaccgtatcgttcgccgtattttcgaatcactgggatataaagtagtaaaa
ctcgaccgtgtattctttgccggactgaccaaaaaaggtctgcgccgcggagactggcgt
tacctgtcggaagcagaagtaaactacctccgcatggggtcgtttgagtaa
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