Bacteroides thetaiotaomicron VPI-5482: BT_4237
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Entry
BT_4237 CDS
T00122
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
bth
Bacteroides thetaiotaomicron VPI-5482
Brite
KEGG Orthology (KO) [BR:
bth00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bth03016
]
BT_4237
Enzymes [BR:
bth01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
BT_4237
Transfer RNA biogenesis [BR:
bth03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BT_4237
Prokaryotic type
BT_4237
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
AAO79342
UniProt:
Q89ZY4
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All DBs
Position
5580472..5581281
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AA seq
269 aa
AA seq
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MQRYFIYLAYDGTNYHGWQIQPNGSSVQECLMKALSTFLRRDVEVIGAGRTDAGVHASLM
VAHFDHEDVLDTVTVADKLNRLLPPDISVYRVRQVKPDAHARFDATARTYKYYVTTAKYP
FNRQYRYRVYGSLDYERMNEAARTLFEYIDFTSFSKLHTDVKTNICHISHAEWTKMEGED
TTWVFTIRADRFLRNMVRAIVGTLLEVGRGKLTVEGFRKVIEQQDRCKAGTSAPGNALFL
VNVEYPEDIFSEETKKSVLSTLLPEGGEC
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
gtgcaaaggtattttatttatttggcttatgatggaaccaactatcacggttggcagata
caacccaacgggagtagtgtgcaggaatgcttgatgaaggctttgtctacttttctgcgt
cgtgatgtggaagtgataggtgctggccggacggacgcgggggtgcatgcctcgctgatg
gtggcacattttgatcatgaagacgtgctcgatacggtgactgtcgccgacaagttgaac
cgtctgttgcctccagatatttctgtctatcgtgtccgtcaggtaaaaccggatgcgcac
gcccgttttgacgcgactgcccggacatataagtattatgtgactaccgccaaatatcct
ttcaaccgccagtaccgctaccgtgtctatggttcattggattatgaacggatgaacgag
gctgcacgaaccctgttcgaatacattgattttacaagtttcagcaaactgcatacagat
gtaaaaacaaacatctgccacatctcccatgccgaatggacgaagatggaaggcgaagac
accacctgggtatttactatccgtgccgaccgctttctccgtaatatggtgcgtgccatc
gtaggaacattgctcgaggtaggacgcggcaaactgaccgtggaaggtttccgtaaagtg
atagaacaacaggatcgttgcaaagcgggaacttccgctccgggaaatgcgctcttcctt
gtcaacgtagaatatccggaagatattttctcagaggaaactaaaaagtcagtactatct
acactccttcccgaaggaggggagtgttag
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