Bacteroides thetaiotaomicron VPI-5482: BT_4355
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Entry
BT_4355 CDS
T00122
Name
(GenBank) RNA polymerase ECF-type sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
bth
Bacteroides thetaiotaomicron VPI-5482
Pathway
bth02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
bth00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BT_4355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bth03021
]
BT_4355
Transcription machinery [BR:
bth03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BT_4355
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
Sigma70_r2
HTH_30
Sigma70_ECF
HTH_10
HTH_Tnp_ISL3
GerE
HTH_AsnC-type
HTH_28
HTH_23
PhyR_sigma-like
HTH_38
HTH_24
DUF3825
HTH_20
Toxin_YhaV
HTH_11
UPF0122
HTH_40
Fib_alpha
TnsD
DUF3095
PCI
PH_19
wHTH_Par
Motif
Other DBs
NCBI-ProteinID:
AAO79460
UniProt:
Q89ZM2
LinkDB
All DBs
Position
complement(5739541..5740116)
Genome browser
AA seq
191 aa
AA seq
DB search
MEELRIKRNDLQLSEIQRGGLKAFETLFRQYYAVLCAYGHKYVDFHDAEEIVQDSLLWIW
ENRENLIIESSLSSYLFKMVHHKALNKLAHIDAIKRADTRFYEEMQEMIHDMDFYQIKEL
TKRIEDAVAALPESYRQAFVMHRFRDMSYKEIAETLEVSPKTVDYRIQQALKQLRIDLKD
YLPLLLPLLFP
NT seq
576 nt
NT seq
+upstream
nt +downstream
nt
atggaagaactacgcataaagaggaatgatcttcaattatctgaaatacagcgtggaggc
ctaaaagcctttgaaacgctattcaggcaatactatgcagtgctatgtgcctatggtcat
aaatacgttgacttccacgatgcagaagaaatagtgcaagactcccttctatggatatgg
gaaaaccgggaaaacttaatcattgaatcatcattaagttcttatctctttaaaatggta
catcacaaggctttaaataagcttgcacacattgatgccatcaaacgtgctgatacgcgt
ttctatgaagaaatgcaagagatgatacatgatatggacttttatcagattaaagagcta
accaaacgaattgaagacgcggttgctgcattgccggaaagttaccggcaagcatttgtc
atgcatcgtttccgggatatgagctacaaagaaattgcagaaacattggaagtgtctcca
aagactgtagattatcgtattcagcaagcactcaagcaattacgcatcgatttaaaagat
tatctgccattgctgcttcctttactgtttccttaa
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