Bacteroides thetaiotaomicron VPI-5482: BT_4643
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Entry
BT_4643 CDS
T00122
Name
(GenBank) RNA polymerase ECF-type sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
bth
Bacteroides thetaiotaomicron VPI-5482
Pathway
bth02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
bth00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BT_4643
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bth03021
]
BT_4643
Transcription machinery [BR:
bth03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BT_4643
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_ECF
Sigma70_r2
Sigma70_r4
GerE
HTH_23
DUF2774
RbsD_FucU
PhyR_sigma2
Spectrin_Anc-1_2
DUF8439
Motif
Other DBs
NCBI-ProteinID:
AAO79748
UniProt:
Q89YT8
LinkDB
All DBs
Position
6077858..6078409
Genome browser
AA seq
183 aa
AA seq
DB search
MLNELLILTKIKAGDIKAFEELFRCYYSPLCWYAASITGRMEVAEEIVEELFYVLWKDRE
QLQIFQSVKNYLYRATRNQSIQYCEHEEVKERYRESVLTASSSEQVTDPHQQMEYEELQK
LINNTLEKLPERRMQIFKMHRTEGKKYAEIAVQLSLSVKTVEAEMTKTLRTLRKEIENYI
QMK
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atgctgaatgaactgctcatactgacaaaaataaaggcaggtgacataaaagcgtttgag
gaactatttcgctgttactattctcccttgtgttggtatgcggcaagcattaccggacgg
atggaggtggctgaggaaattgttgaggaactgttttatgtgctttggaaggatagggaa
cagttacagattttccagtctgtaaaaaactacctctacagggcgacacgtaatcagtca
attcaatactgtgagcatgaagaggtcaaagagcggtatagagagtctgtgctgactgca
tcttcttcggaacaggtgacagatcctcatcagcagatggaatatgaagaacttcagaag
ctgataaataatacccttgagaaattgccggaacgcagaatgcagatatttaaaatgcac
cggacggagggaaagaaatatgcggaaattgcagtccagctttctctctccgtcaaaacg
gtggaagcggaaatgacgaagactttacgaactttgcgaaaagaaatagaaaattatatt
caaatgaaatga
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