Bacteroides thetaiotaomicron VPI-5482: BT_4657
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Entry
BT_4657 CDS
T00122
Name
(GenBank) heparinase III protein
KO
K19052
heparan-sulfate lyase [EC:
4.2.2.8
]
Organism
bth
Bacteroides thetaiotaomicron VPI-5482
Brite
KEGG Orthology (KO) [BR:
bth00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
BT_4657
Enzymes [BR:
bth01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.8 heparin-sulfate lyase
BT_4657
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hepar_II_III_N
Hepar_II_III_C
Motif
Other DBs
NCBI-ProteinID:
AAO79762
UniProt:
Q89YS4
Structure
PDB
PDBj
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All DBs
Position
complement(6094272..6096272)
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AA seq
666 aa
AA seq
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MNKTLKYIVLLTFACFVGKGYAQELKSEVFSLLNLDYPGLEKVKALHQEGKDEDAAKALL
DYYRARTNVKTPDINLKKITIGKEEQQWADDGLKHTFFVHKGYQPSYNYGEDINWQYWPV
KDNELRWQLHRHKWFTPMGKAYRVSGDEKYAKEWAYQYIDWIKKNPLVKMDKKEYELVSD
GKIKGEVENVRFAWRPLEVSNRLQDQTTQFQLFLPSPSFTPDFLTEFLVNYHKHAVHILA
NYSDQGNHLLFEAQRMIYAGAFFPEFKEAPAWRKSGIDILNREVNVQVYNDGGQFELDPH
YHLAAINIFCKALGIADVNGFRNEFPQEYLDTIEKMIMFYANISFPDYTNPCFSDAKITE
KKEMLKNYRAWSKLFPKNETIKYLATDGKEGALPDYMSKGFLKSGFFVFRNSWGMDATQM
VVKAGPKGFWHCQPDNGTFEMWFNGKNLFPDSGSYVYAGEGEVMEQRNWHRQTSVHNTVT
LDNKNLETTESVTKLWQPEGNIQTLVTENPSYKNFKHRRSVFFVDNTYFVIVDEVSGSAK
GSVNLHYQMPKGEIANSREDMTFLTQFEDGSNMKLQCFGPEGMSMKKEPGWCSTAYRKRY
KRMNVSFNVKKDNENAVRYITVIYPVKKSADAPKFDAKFKNKTFDENGLEIEVKVNGKKQ
SLKYKL
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaaccctgaaatatatcgtcctgctgacatttgcttgtttcgtaggcaaaggc
tatgcccaagagttgaaaagcgaggtattctcgcttctcaacctggactaccccggattg
gagaaagtaaaagccttacatcaggaaggcaaagatgaggatgccgcaaaagcactgctc
gactactaccgtgcacgtacgaatgtgaagacgccggatattaatctgaaaaagatcact
atcggcaaagaagaacagcaatgggcggatgacggattgaagcatacattctttgttcac
aaaggctatcagccttcttacaactacggagaagatatcaactggcaatactggccggtg
aaagacaatgaactccgctggcagttgcaccgtcataaatggtttactccgatgggtaag
gcataccgtgtatcgggtgacgagaaatatgccaaagaatgggcataccaatacatcgac
tggattaaaaagaatccgttggtgaagatggacaagaaagaatacgaactggtaagtgac
ggtaagattaaaggcgaagtggaaaatgtacgtttcgcatggcgtccgctggaagtcagt
aatcgtctgcaggatcagactacccagttccagttgttcctcccctctccttctttcact
ccggatttcctgactgaatttctggtgaactatcataaacatgccgtacatattctggct
aattactctgatcagggtaatcacttgttgttcgaagcccagcgtatgatttatgcaggt
gcattcttcccggaatttaaagaagctccggcctggagaaaaagcggtatcgacattctg
aaccgtgaagtaaacgtacaggtttacaacgatggcggccagtttgaacttgacccgcat
tatcatcttgctgctatcaatatcttctgcaaggcattgggtatcgcggatgttaacgga
ttccgtaatgagttcccacaggaatatctggatactatcgaaaagatgatcatgttctat
gccaatatttctttcccggattacacaaatccgtgtttcagtgatgctaaaatcacagaa
aagaaagaaatgctgaagaactatcgtgcatggagcaaactgttcccgaaaaacgaaact
atcaagtatttggcaacagacggcaaagaaggcgcgttacccgattatatgtcgaaaggt
ttcctgaaatcaggtttctttgtgttccgcaattcctggggaatggatgctacacaaatg
gtagtaaaagccggtccgaaaggtttctggcactgtcagccggataacggtactttcgaa
atgtggtttaacggcaagaacctgttcccagactccggttcgtatgtgtatgccggtgaa
ggcgaagtgatggaacaacgcaactggcatcgtcagacttccgtacacaacaccgtgact
ctggacaataagaatctggaaacaaccgaatctgttactaaactgtggcagccggaaggc
aatatccagaccttggttacagaaaacccaagctacaagaacttcaagcaccgccgttcg
gtcttcttcgtagacaatacctactttgtcattgtagatgaagtatcaggcagcgccaaa
ggttctgtcaacctgcactatcagatgccgaaaggtgagatagccaacagccgtgaagac
atgacattcctgactcaattcgaagatggaagcaacatgaaacttcaatgcttcggccct
gaaggcatgagcatgaaaaaagagccgggatggtgttctactgcatatcgcaagcgctac
aaacgtatgaatgtttcattcaacgtaaagaaagacaatgagaatgcggtacgttacatc
acagttatttacccagtcaagaagagcgcagatgcccctaaatttgacgctaagttcaag
aacaaaacgttcgatgaaaacggactggaaatagaagtgaaagtaaacggcaagaaacag
tcattaaaatataaattataa
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