Bacteroides thetaiotaomicron VPI-5482: BT_4662
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Entry
BT_4662 CDS
T00122
Name
(GenBank) heparinase III protein, heparitin sulfate lyase
KO
K19052
heparan-sulfate lyase [EC:
4.2.2.8
]
Organism
bth
Bacteroides thetaiotaomicron VPI-5482
Brite
KEGG Orthology (KO) [BR:
bth00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
BT_4662
Enzymes [BR:
bth01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.8 heparin-sulfate lyase
BT_4662
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Gene cluster
GFIT
Motif
Pfam:
Hepar_II_III_N
Hepar_II_III_C
Motif
Other DBs
NCBI-ProteinID:
AAO79767
UniProt:
Q89YR9
Structure
PDB
PDBj
LinkDB
All DBs
Position
complement(6104875..6106983)
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AA seq
702 aa
AA seq
DB search
MKNIFFICFCALFAFSGCADDDDDLLTGGNVDIDLLPDAKPNDVVDPQVFEAINLNYPGL
EKVKEFYEAGEHYYAANALLEYYRTRTNVTNPNLSLINVTISEAEQAKADYALVDYRFHV
NNFYEDKETLKPYSVKQDGGINWEYSPKDASDEYQKQLHRHQWFIPQAKAYRVSGDEKYI
QSWIEVYKNWIENNPKPTTGPNTTSWWQLQVSTRIGDQVQLLEYFKNSVNFTPEWLSTFL
VEFAEQADFLVDYPYESGGNILISQANALATAGTLMPEFKNAEKWMNTGYQILSEEVQNQ
IMSDGWHKEMSLHYHIGIVADFYEAMKLAEANQLSSKLPSDFTEPLRKAAEVVMYFTYPN
YFIKGSDNVVPMFNDSWSRTRNVLKNTNFKQYVEMFPDSEELKYMQTAGNGGTAQGRTPN
NDMKLFDQAGYYVLRNGWTPASTVMILSNNKSNDASNSLSAYSHNQPDNGTFELYHNGRN
FFPDSGVCTYYTSGGDNDLRYWFRGIDKHNTLSIGKQNIKKAAGKLLKSEEGATELVVFE
NQGYDNLKHRRAVFYVNKKFFVLVDEGIGNAEGTINLSFNLCEGTASEVVMDTDKNGVHT
AFSNNNNIIVRTFANKAVTCSPFTGRIAYLVDGAYNTRQSYTIDMNKSADETARYITVIL
PVNGSTDTSSISAKFIDSGYSENSASVEVSVNGETHTLSYTL
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgaagaacatcttctttatttgcttttgtgcgctattcgcatttagtggatgcgcagac
gatgatgatgatctattaaccggagggaatgtagatatagatctgcttcctgatgccaaa
ccaaacgatgttgttgatcctcaagtattcgaggctatcaacctcaactaccccggtctg
gaaaaagttaaagaattctacgaggcaggcgaacattattatgcagccaatgctttattg
gaatactatagaacgagaaccaatgttacaaatccgaacttatctttaattaatgtgacg
atctcagaagcagagcaggcaaaagctgattatgcactggtagattatcgctttcatgtt
aacaacttctatgaagataaggaaaccctgaaaccctattcagtaaaacaagacggaggt
ataaactgggagtattcaccgaaagatgcatctgatgaatatcagaaacaacttcatcgc
catcagtggttcatcccccaagccaaagcttaccgtgtaagtggagatgagaaatacatt
caatcatggattgaggtatataagaattggatagaaaacaatccgaagcctacaacagga
cctaatactacctcatggtggcagttacaggtatctacccgtatcggtgaccaagtacaa
ttgcttgaatacttcaagaactctgttaattttactccggaatggctttctacattcttg
gtagaatttgcagaacaagcagactttctcgtagattatccgtatgaatcaggaggtaac
atacttatatcacaagcgaatgcattggctactgccggaacgttaatgccggaatttaag
aatgcggagaaatggatgaatacaggatatcagatacttagcgaagaagtacaaaatcaa
attatgagtgacggatggcacaaggaaatgtcgctccactatcatatcggtatcgttgcg
gatttctacgaggcaatgaaattagcagaggcaaaccaactctccagtaaattgccgtca
gattttacagaaccactgcgtaaagcagcagaagtagtgatgtacttcacatatcctaat
tactttatcaagggttccgataatgtggtcccaatgttcaacgactcatggagccggaca
cgtaatgtccttaaaaatacgaactttaagcaatatgtggaaatgttcccggatagtgaa
gaattgaaatatatgcaaactgccggaaatggtggaacagcacagggacgtacccccaat
aatgatatgaagctattcgaccaggcaggatattatgtattacgaaatggttggacaccg
gcttctacagtcatgattttaagcaataacaagagtaatgatgcttctaattcacttagt
gcttatagtcataaccagccagataatggaactttcgaactttaccataacggacgaaat
tttttccctgattcaggtgtgtgtacttattataccagcggtggagacaatgacttacgt
tactggttccgtggtatcgataaacacaatactttatcaatcggaaaacagaatatcaaa
aaggcagcaggcaaactgttgaaatcagaggaaggagcgactgaattagttgtatttgag
aatcaaggatatgataacttaaagcaccgtcgtgcagtcttttacgtaaacaaaaaattc
tttgtattagtagatgaaggtattggaaatgcagaaggtactattaatctaagtttcaat
ctttgcgaaggcactgccagcgaagttgttatggatacagataaaaatggagtccataca
gcattcagcaataataataacattatagtccgcacttttgccaataaagcagtaacctgt
tctccattcacggggcgtatagcctatctcgtagacggggcttacaacacacgtcaatct
tataccatcgatatgaataagagtgctgatgaaaccgcacgttacattacagttattctt
ccagtcaatggaagtactgatacgtccagtatctcagccaaattcatagatagcggatat
tccgaaaacagcgcttctgtagaagtaagtgtgaatggagagacacatacattatcttat
accttataa
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