Burkholderia thailandensis 2003015869: DR62_2392
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Entry
DR62_2392 CDS
T03763
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
btha
Burkholderia thailandensis 2003015869
Pathway
btha03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
btha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DR62_2392
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
btha03400
]
DR62_2392
Enzymes [BR:
btha01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
DR62_2392
DNA repair and recombination proteins [BR:
btha03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DR62_2392
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
PDDEXK_1
UvrD_C_2
DUF374
Motif
Other DBs
NCBI-ProteinID:
AIP63430
LinkDB
All DBs
Position
1:2321784..2325602
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AA seq
1272 aa
AA seq
DB search
MSHAAQSGLPSSELDVFACPLDGVNQIEASAGTGKTWNICALYVRLLLEKDLGADEILVV
TFTKAATAELHERIRARLAQLAHALDTGDDGGDPFVARLFETTLAPGRGLDPQTAAKRVR
RALRAFDQAAIHTIHAFCQRALQEAPFAAAMPFAFEMEADDGALRFELAADFWRTRVEPV
AAAQPAFAEWLVEYGAGPAALDAQLARRLKKPLARLRWDGLHAADDGAESTARAHFDAAA
AIWRDERGVLDALLADAQPSLNQRSHKPDAVSEALDAWARYFEQASAVAALPRAALKLTQ
SSLEKATKKGGTTPRHAFFDVAQALEAAVAAVEAAQRARWLSLVEQWLDIAPAELAQRKR
TRRVVSFDDLLANLYRALDAHPWLRETLRARYPAALIDEFQDTDPLQFAIFDTIFAPAGP
LFLVGDPKQAIYSFRAADLHTYLAARARASARYTLAVNQRSTPAIVDACNRVFGANPRAF
VLDGLDYEPVRAGSRVRAPLVDATDPLAGAGDFRVWTLPAGDDVLTKRDAQRHAAHACAA
EIARLMRGARERAVTLGGEPLAASDIAVLVQTHRQGSLVKRVLAAWGIGSVELAQASVFA
TIDAEQLERVLAAIDAPGDLRRLRSALASDWFGLDAAALWRLEQGDAGPGGTEGAASDAS
GNDGHARAAAAGAVAPPSADTDAMGWVERFSRYRLLWRERGFAVMWRTLAGELRIAERLM
AGPDGERRVTDINHLAELTQARASAQPGIAPTLRWLAAQRLDGGGDDAQLRLESDRNLVQ
IVTVHKSKGLEYAIVFCPFLNDGGLREPPGSGLPDAREYHDESGVAVLHYGCDEEAAERA
SREAAREQAAERARLVYVALTRAVYRCYLVAGTYQSSRSTKEARRSVLNWLVAGAGRDFD
AWLKEPPEDAELAVRWQALAGGPVTLGALPVPARREPLEAGHDANATRAARRAKRGLRDA
WRIASFSSLASAIARDESGVAGAADDEMRPDHDALAAAVGADVLDAFDTLDVAGAIAEAA
AIASEPAEDDILAFPRGAAAGECLHRLLELSDFSDASTWPPAAQRALHERPVEAEPALAG
RLPAMMTRLVADLAATELVPGMRLAALDPARRLTEMEFLFPAPALDFNALRRLLAAHGYP
DVALEAGTLAGFIKGFIDMIVEHDGRFWIVDWKSNHLGTTPDAYGERALDAAMAHHAYHL
QALLYTVALHRYLRVRMRDYDYDAHVAGYLYLFVRGVRPDWRSGGASAGVHARRPARALI
EALDALMLEGGA
NT seq
3819 nt
NT seq
+upstream
nt +downstream
nt
atgagccatgcagcgcaatccggcctgccgtcgagcgagctcgacgtcttcgcgtgcccg
ctcgacggcgtgaaccagatcgaggcgtccgccggcaccggcaagacgtggaacatctgc
gcgctgtacgtgcgcctgctgctcgaaaaggatctcggcgcggacgagattctcgtcgtc
acctttacgaaggcggcgacggccgagctgcacgagcggattcgcgctcgcctcgcgcag
ctcgcgcacgcgctcgacacgggcgatgacggcggcgatccgttcgtcgcacgcctgttc
gagacgacgctcgcgcccgggcgcggcctcgatccgcaaacggccgcgaagcgcgtgcgc
cgcgcgctgcgcgcgttcgatcaggcggcgatccacacgatccacgcgttctgtcagcgg
gcgttgcaggaagcgccgttcgcggcggcgatgccgttcgcgttcgagatggaggcggac
gacggcgcgctgcgcttcgagctggccgccgatttctggcgcacgcgcgtcgagccggtc
gcggcggcccagccggcgttcgccgagtggctcgtcgaatacggcgcggggcccgcggcg
ctcgacgcgcagctcgcgcggcggctgaagaagccgcttgcgcgattgcgctgggacggg
ctgcacgcggctgacgacggtgcggaaagcaccgcgcgcgcgcacttcgatgcggcggcc
gcgatctggcgtgacgagcggggcgtgctcgatgcgctgctcgccgacgcgcaaccctcg
ttgaaccagcgctcgcacaagccggatgccgtgagcgaggcgctcgacgcgtgggcgcgc
tacttcgagcaggcgagcgcggtggccgcgttgccgcgcgcggcgctcaagctcacgcag
tcctcgctcgagaaagcgacgaaaaagggcggcacgacgccgcgccacgcgttcttcgac
gtcgcgcaggcactcgaggcggccgtcgccgcggtcgaggccgcgcagcgcgcgcgctgg
ctgtcgctcgtcgagcaatggctcgacatcgcgcccgccgagcttgcgcagcgcaagcgc
acgcgccgcgtcgtatcgttcgacgatctgctcgcgaacctgtatcgcgcgctcgacgcg
catccgtggctgcgcgagacgctgcgcgcgcgctatccggccgcgctcatcgacgaattc
caggatacggacccgctgcagttcgcgatcttcgacacgatcttcgcgcccgccggcccg
ctctttctcgtcggcgatccgaagcaggcgatctacagcttccgcgcggcggacctgcac
acgtatctcgccgcgcgcgcgcgggcgtccgcgcgctacacgctcgcggtgaaccagcgc
tcgacgcccgcgatcgtcgatgcgtgcaaccgcgtgttcggcgcgaacccgcgcgcgttc
gtgctcgacgggctcgattacgagccggtgcgcgcgggctcgcgcgtgcgcgcgccgctc
gtcgacgcgaccgatccgctcgccggcgcgggcgacttccgcgtctggacgctgcccgcc
ggcgacgacgtgctgaccaagcgcgatgcgcagcggcacgccgcgcatgcatgcgcggcg
gaaatcgcgcggctgatgcgcggcgcgcgcgagcgtgcggtgacgctcggcggcgagccg
ctcgcggcgtccgacatcgcggtgctcgtgcagacgcaccggcaaggcagcctcgtgaag
cgcgtgctggccgcgtgggggatcggcagcgtcgagctcgcgcaggcatcggtgttcgcg
acgatcgatgccgagcaactcgagcgcgtgctggcggcgatcgacgcgccgggcgatctg
cggcgtctgcgctcggcgctcgcgtccgactggttcggactcgacgcggcggcgctctgg
cgtctcgaacagggcgacgcggggccgggcggtaccgaaggcgccgcaagcgatgcgagc
gggaacgacggccatgcgcgcgccgcggcggcgggcgcggttgcgccgccgtccgcggac
accgacgcgatgggttgggtcgagcgcttctcgcgctaccggctgctgtggcgcgagcgc
ggcttcgcggtgatgtggcgcacgctcgccggcgagctgcgtatcgccgagcggttgatg
gcggggccggacggcgagcggcgcgtgaccgacatcaatcatctggccgagctgacgcag
gcgcgcgcgtccgcgcagccgggcatcgcgccgacgctgcgctggctcgccgcgcagcgc
ctcgacggcggcggggacgatgcgcaactgcggctggaatccgatcgcaatcttgtgcag
atcgtcaccgtccataagtcgaaggggctcgaatacgcgatcgtgttctgcccgttcctg
aacgacggcgggctgcgagagccgcccggttccggcctgcccgacgcgcgcgaatatcac
gatgagtcgggcgtcgcggtgctgcattacggctgcgacgaagaagcggccgagcgcgcg
tcgcgcgaggcggcgcgcgagcaggcggccgagcgcgcgcggctcgtctacgtcgcgctc
acgcgcgcggtctaccggtgctatctggtcgcgggcacctaccagtcgtcgcgctcgacg
aaggaggcgcgacgcagcgtgctgaactggctcgtcgcgggcgcgggccgcgatttcgat
gcgtggctgaaggagccgcccgaagacgcggagctcgccgtgcgctggcaggcgctcgcc
ggcggcccggtgacgcttggcgcgctgccggtgcccgcgcgtcgcgagccgctcgaggcc
ggacacgacgcgaacgcgacgcgagccgcgcggcgcgcgaagcgcgggctgcgcgacgca
tggcggatcgcgagcttcagctcgctcgcgtcggcgatcgcgcgcgacgagagcggtgtc
gcgggtgcggccgacgacgagatgcgccccgatcacgacgcgcttgcggcggcggtcggc
gcggacgtgctcgatgcgttcgatacgctcgatgtggcgggcgcgatcgcagaggccgcg
gccatcgcgagcgagcccgccgaagacgatatcctcgcgtttccgcgcggcgcggcggcg
ggcgaatgcctgcaccggctgctcgagctgagcgatttttccgacgcgtcgacgtggccg
ccggccgcgcagcgcgcgttgcacgagcgccctgtcgaagcggagcccgcgcttgccggg
cggctgcccgcgatgatgacgcggctcgtcgccgatctcgcggcaacggagctcgtgccg
ggcatgcgcctggcggcactcgacccggcgcggcggctgacggaaatggaattcctgttt
cccgcgcccgcgctcgatttcaacgcgttgcggcggttgctcgccgcgcacggctatccg
gacgtcgcgctcgaagccggcacgctcgccgggttcatcaaaggattcatcgacatgatc
gtcgagcacgacggccgcttctggatcgtcgactggaagtcgaaccatctcggcacgacg
cccgacgcgtacggcgagcgcgcgctcgacgccgcgatggcgcaccacgcatatcatctg
caggcgctgctctatacggtcgcgctgcatcgctatctgcgcgtgcggatgcgcgactac
gactacgacgcgcatgtcgcgggctacctgtacctgttcgtgcgcggcgtgcgccccgat
tggcgaagcggcggcgcgagcgccggcgtgcacgcgcgccggcccgcgcgcgcgctgatc
gaggcgctcgacgcgctgatgctcgaggggggcgcatga
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