Burkholderia thailandensis 2003015869: DR62_3560
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Entry
DR62_3560 CDS
T03763
Name
(GenBank) type IV secretion protein Rhs
Organism
btha
Burkholderia thailandensis 2003015869
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6531
PAAR_motif
RHS
OCRE
Motif
Other DBs
NCBI-ProteinID:
AIP67132
LinkDB
All DBs
Position
2:887289..891950
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AA seq
1553 aa
AA seq
DB search
MGEVQSSAPPDSRQKLAALAQRGSNADAVQTVSNMGLAINAAQVTAAGTSAWAAGTFQCF
AGRVIAPLGGAMLGGALAEAVGADRPVTWVLGKMGLPAVAKPGKAPARVGHKIVHENAFI
GALTGLLAGIAVGVAIAAAAAAIVATGGAAAVAIAAAGPFVVGFVSGAVGGFVGAAVAKG
IGHTGSVTGAIADGSPNVSFEGARVARVTDPVTCSKDPGTPPPQIAQGSLTVSVNGLPLA
RIGHKITCSAVIQEGCTTISADETTGTFGKIDANVSLLEQLVLTATDVIMMRSATKEGGL
LDGVLRELLGEPIDMATGDYADYRTDFTWPHVLPLTISRAYAGRQPVEGLLGDRWISNWS
QRLRYRRPADGPATVTFFDADGQQLVYPVPHEPFNAINFWAPHYALHGNRARAVVFDERS
QQSLIFEPAHAGDDVARLTRIEDRNGNTIDFEYNALGRLCTVRHSGGMTLWVTCDSRGLL
QSVSERPGGEGELVRYRFDGKRLTDVHSRFQGEFHFGYTDEGWLNHWRDSGATEVALRYD
ERGRVVATRTNTALYDDRFEYDDEQRRTTYIDALGHRHQRWFDAENRLIRSQDPLGRVMH
ASFDERGWLSARTDPIGRVSQYRYDARGRPVKVIDVYGRESRYRWNAAGQLIERTDPFGA
LRWHFSAEGNLVAFEGPSGETRFRYDPRGLLVSRTDPDGATYAWRHDEAGRPDRWTDPLG
RHTHLDRDRYGRLRSRTDAAGHRTVYGYEPGPSNPREALSSVTYPDGAIARFHYDSEGML
REAVNPLGHGIRYTWGAFDLLASVTDPSGAVTQYHRDGTARLTGVTNALGQRWTLERDAA
GQVIAETDWSGRCTRYVRNRLGQVTEKHLPDGVVLRYEYDAYDRLISLAGPLQKHTFAWG
SRGQLTRAQVWERSDDADAWRADNDVCLEYDDAFRLIEESQSGQAIRYEYDVMGRPASLG
TPSGQTRWQYDLAGQLDVIESNGHQFRFGYDVLGRESHRRYLPTEQRRNWQPEWADRYPD
GFAQRQAHDARSQLTSQVFGALPWHDEVAPEAFGPQRARHYEWDVAGHCVGMQEERKGLP
VEAGRWRYDARGQMVDAYHERTESRSARERYRYDALGHVVEQQIDGGEIRMHDYLGDQLI
SAGPNVYKYDARGRMVARTELRDGFRPRSWRYHWDDFDRLREVTTPGGERWAYRYDAFGR
RISKVCTHGGRRNRLKRAAYLWCGSRMIEAWRTYDERDGSRHDIQRWHYRPSTHIPLAQE
RLRFDDQPDPQTSEWYPLACDPNGAPHTLYSSNGRALWRARRTAWGDTAGDDGRDSLRSA
VREQLRLGHRDSDEFDPPDCELRFPGQWADEESGLHYNLHRYYDPSTGQYLSADPVGLAG
GLRTHAYVHDPMQWGDPFGLQGYDTVRNHRAGNKQIDYDGQRWNVPKGKNPTEVIPESDP
IGKKLQDATDNAAARWNTSNLTPAESNAIESARASGEYWRANLLQQQAKGRWIESQVKSD
PDIAGMDLDWNRVGVDAVDPNTGLSYDIMSGSKSNMDAHAMRMSDVVFRMITF
NT seq
4662 nt
NT seq
+upstream
nt +downstream
nt
atgggcgaagtgcagagtagcgcgccgccggacagccggcagaagctcgcggcgctagcg
caacgaggcagcaatgcggacgccgtgcagacggtgtccaacatggggctcgcgatcaac
gcggcgcaagtcacggcggccgggacgagcgcgtgggcggccggcacgttccagtgcttc
gccgggcgcgtgatcgcgccgcttggcggcgcgatgctcggcggcgcgctcgccgaggcg
gtcggcgcggaccgcccggtcacatgggtgctgggcaagatggggcttccggcggtcgcg
aagcccggcaaggcgccggctcgcgtcggacacaagatcgtccacgagaacgcattcatc
ggcgcgctgaccggcctgctggcggggatcgcggtcggcgtggccattgccgccgcggcg
gccgcgatcgtggcgacgggcggcgccgccgcggtcgccatcgcggcggccggcccgttc
gtcgtcgggttcgtctcgggcgcggtgggcggattcgtcggcgcggcggtggccaagggc
atcggccataccggctcggtgacgggcgcgatcgcggacggctcgcccaacgtctcgttc
gaaggggcgcgggttgcccgcgtgaccgacccggtgacatgcagcaaggaccccggcacg
cctccgccgcagatcgcgcagggcagcctgaccgtatccgtcaacggcctgccgctcgcg
cggatcggccacaagatcacgtgctcggcggtcattcaggaaggctgcacgacgatcagc
gcggacgagacgaccggcacgttcggcaagatcgacgcgaacgtgtcgcttctcgagcag
ttggtgctgacggccaccgacgtcatcatgatgcgttcggcgaccaaggaaggcggcttg
ctggacggcgtgctgcgcgagctgctcggcgagccgatcgacatggcgacgggcgattac
gccgactaccggacggatttcacgtggccgcacgtgctgccgctcacgatttcccgtgcg
tacgcggggcggcagccggtcgaggggctgctcggcgacaggtggatcagcaactggtcg
cagcgcctgcgatatcggcggccggcggacggcccggccaccgtcacgttcttcgacgcg
gatggccagcaactcgtgtatccggttccgcacgagccgttcaacgcgatcaacttctgg
gcgccgcactacgcgttgcacggcaatcgcgcgcgggccgtcgttttcgacgagcgctcg
cagcaatcgctgattttcgagccggcgcatgccggcgatgacgtcgcccgcctgacccgc
atcgaggaccgcaacggcaacacgatcgacttcgagtacaacgcgctcggccggctatgc
acggtgcggcacagcggcgggatgacgctgtgggtcacctgcgattcccgcgggctgttg
cagagcgtgtcggagcggccgggcggggagggcgaactggtccgctatcgtttcgacggc
aagcgcctcaccgacgtgcatagccgcttccagggcgaatttcatttcggctataccgac
gagggctggctcaatcactggcgcgacagcggcgcgaccgaggttgcgctgcgctatgac
gagcgcggaagggtggtcgccacgcgcacgaataccgcgctgtacgacgatcgattcgag
tatgacgacgagcaacggcggacgacgtacatcgacgcgctcgggcaccggcatcaacgc
tggttcgatgcggagaaccggctgattcggtcgcaggacccgctgggccgggtgatgcat
gccagtttcgacgagcggggctggctgagcgcgcggacggacccgatcggccgagtcagc
cagtaccgttacgacgcgcgcggtcgccccgtgaaagtcatcgacgtatacggaagggag
agtcgatatcgatggaatgcagccgggcagttgatcgagcgaaccgatccgttcggcgcg
ctgcgctggcatttcagcgcagagggcaatctggtggcgttcgaggggccgtcaggcgag
acgcgttttcgatacgacccgcgtggcctgctcgtcagccggactgatcccgatggcgcg
acgtacgcatggcgccatgatgaagcagggcgtcccgacagatggaccgatccgctcggc
cggcacacgcatctcgaccgcgatcgatacggccgactgaggagccgcaccgatgcggcc
ggtcatcggacggtctatggctatgagccgggcccgtccaatccgcgcgaagcgcttagc
agcgtgacgtacccggacggcgcaatcgcgcgctttcactatgactcggaaggcatgttg
cgggaggcggtgaatccgctggggcatggcatccgctatacgtggggcgcattcgatttg
ctggcgagcgtcacggacccgtcgggggcggtcacgcaatatcatcgcgatggcactgcc
cgcctgacgggggtgacgaacgcgctggggcagcgatggacgctggagcgggacgccgcg
ggacaagtgatcgccgaaaccgattggagcgggcgctgcacgcgatatgtgcgtaaccgg
ctagggcaggtcaccgagaagcatctgccggacggcgtcgtgctgcgctatgaatatgac
gcatacgaccggttgatttcccttgccgggccgctgcagaagcatacgttcgcttgggga
tcgcgcgggcaactgacccgagcccaggtttgggagcgtagcgatgacgcggatgcgtgg
cgggccgacaacgacgtatgcctggaatacgacgacgcattccggttgatcgaggaaagc
cagagcgggcaggcgatacgttacgaatatgacgtgatggggcggcccgcgtcgctcggt
acgccgagcgggcagacgcgttggcagtatgatctcgccggccagctcgacgtgatcgag
agcaacggccaccaattccgcttcggctacgacgtgctcggccgggaaagccatcgccgc
tatttgccgacggagcaacggcggaactggcaaccggaatgggcggatcgctatccggac
ggttttgcgcaacggcaggcgcatgacgcgcgaagccaattgacctcgcaggtattcggg
gcgctgccttggcacgacgaggtcgcgcccgaagcctttggcccgcagcgcgcccggcat
tacgaatgggatgtcgcgggccactgcgtcggcatgcaggaagagcgcaaaggcctgcct
gtcgaagcgggccgctggcggtacgacgctcgcggccagatggtcgacgcttaccacgag
cgcaccgaaagtcgaagcgctcgggagcgttaccgatacgacgcgctcggccatgtggtc
gagcagcagatcgatggcggcgaaatccgcatgcatgactacctgggcgatcaactgatc
agtgcggggccgaacgtctacaaatacgacgcgcgtgggcgcatggtcgcgcgcaccgaa
ctgcgcgacggcttccgtccgcgctcatggcggtatcactgggacgatttcgaccgcctg
agagaagtgacgacacccggcggcgaacgctgggcgtatcgctacgacgcgtttggccgg
cgcatcagcaaggtttgcacgcatgggggccgccggaaccgcttgaagcgtgccgcctat
ttgtggtgcggaagccgaatgatcgaggcctggcgaacctatgacgagcgcgacggatcg
cggcacgatatccagcgttggcactatcggccgagcacccacataccgcttgctcaggaa
cggctgcgcttcgacgatcaacctgatccgcaaacgagcgagtggtatccgctcgcctgt
gatcccaatggcgcgccgcatacgctgtacagcagcaacggcagggcactgtggcgcgcg
cggcggacggcatggggcgacacggccggcgacgacgggcgtgattcgcttcgtagcgcg
gtgcgagagcaattgcgattggggcatcgggatagtgacgaattcgatccgccagactgc
gaattgcgattcccggggcagtgggcagatgaggaaagcgggctgcactacaatttgcac
cgctactacgacccatcgaccggccagtatctcagcgccgatccggtggggctggcgggc
gggttgcgaacgcacgcttacgtgcatgatccgatgcagtggggcgatccgttcggtctg
cagggatacgatacggtgagaaaccatcgggcgggcaacaagcagatcgattacgacggt
cagcgctggaacgtcccgaaaggcaagaatccgacggaggtcattccggaatcggacccg
atcggaaagaagctccaggatgcgacggacaacgctgctgcccgctggaacacgtcgaat
ctcacgccggcggaaagcaatgcgatcgaaagcgctcgagcatcgggcgaatactggcgc
gcgaacctgcttcagcagcaggccaagggacgctggatcgaatcccaggtcaagagcgat
ccggacatcgcggggatggatctggattggaatcgcgtgggagtcgatgcggtcgatccg
aatacggggttgagttatgacatcatgtcgggtagcaagagcaacatggatgcgcacgcg
atgcggatgtccgatgttgttttcagaatgatcactttctag
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