Burkholderia thailandensis 2003015869: DR62_5186
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Entry
DR62_5186 CDS
T03763
Name
(GenBank) type IV secretion protein Rhs
Organism
btha
Burkholderia thailandensis 2003015869
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6531
RHS
TEN_YD-shell
XOO_2897-deam
Motif
Other DBs
NCBI-ProteinID:
AIP65057
LinkDB
All DBs
Position
2:2951207..2955826
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AA seq
1539 aa
AA seq
DB search
MALPAVKHMDPVVGIDVHSVIVTPGLPPVFLPHPHVGFMLDLREYVEAAKGVIGSIAMTI
AEEAVQDYLKDHPDDSKKLTNALNSLDNQKKQAERDPMVAEMLRLNRDVSSIRGDVANAV
GAGVGMGGAAGRPIFVNGLMRATAGTHSFHVPGLHFPLGETFAPPDPLPSDDAESYMGSR
TVLANNDPMSFLALPAMSCWAEGIEPPPHNGAHTARTHESMPSSVMLPIPVGRPVLVGGP
PVMNMAAAAKGMFKAFQGSKWAKKLADKLHLKSGFLRCTVLKAEPVDVTTGEVVVQQNDF
TVSGRLPLVWDRYYASHDRHAGAVGFGWRTPADIRLELMRNEDGIGAAACFPDHATAFDM
VPADDGWPARTYDWQHGHALYRDDGRMVLRTREGIEYGFVLPSRWRDAVAALDGDDSRLT
LPIGRMADLNGNAWVFERDVYGGLVRLVEWKRDGRTERVVECGTGSGLHAGLLTSLTLID
ADGNAHPLVSYEHDRERNLAAAIDAMAHPHHFEYAAGHRMVSHTSARGVSFYYSYQQGDD
GVWRVDHAWGDNGLFDYRFVYDRARMETRVTNSLGHTTITQMNERGMPIAEIDPLGGVTG
YRYDTQGRASAVIDTAGRTTAWEYDAYGSLVAQTLPDGSVVRAEYDADGRPVCITMPTAR
QLRYEWDEHGHLRSRTTSSRAVSRYVYDAYGQLVSYSGSRGAITRFEYDRDGNLATVTDA
LGNRTRYVRDARGRVVWMADPRGQVGLYEYDGNGNLTRAVLPGGKEIRCEFDDDGNLVHY
RDPAGQSTTLAYSPIGLVERRIAPSGGIVDCRYDTEGQLVGVVNERGEQYALKRDPLGRI
VSESDYWGQTWHYRYGGSGELLCSTDPLGRVVEYQYDRCGRIVEKLARASADDAFVQVHR
FAYDQCGNLILAENDDSRVEFCHDADGRVIEEKQGDDFTINNVFDAAGNRIERRTRLLSE
GALIEHVVHYEYDVLNAVVSIRIDGSAAVVIERDDLGQAVSERLGPALRRAFSYEAGGQL
AVQTLFASTGTMFASEYAYDPNGEVIEKRDERGRMERFEYDSVGRVVSHLGARGIVRRLA
YDLAGDLLRTRVSGYGAAALADAEKAANWIRDGEYEGCYCAFDRAGNMVHRRDAEQNLAL
CWDSAGQLRETIALRPATADVASARKRTRTQYEYDALRRRTRKLVQIESEGEPDSVFSYV
SCFFWDGDALVGERTTGGWVGRAGRAEQDERDATSLAPPSPAGSNNGNWLTLQSDHVCEW
FYYPRTFHPLGVVHGHPGEKRELARATVGSPSKADATYFYQSDPNGAPVRMLDVEGNVAW
EASYDANGGIEQFGIQAMPQPLRLQGQYFDAETGMSYNRHRYYDARIGQFVSEDPIRLSG
GENLYRYCVNSISWADPLGLDRVPLFDPNNRLSFNAIWAYTGNLPTPSDVTVVRPATSWG
RNSGVLKWQDHYYVFASAGKKSHSEDAIIDFIKQHDIKPSEIQGLYSILSPCAEEKKSCL
EKTKGEGLEFDWSLFHQTDNVGSEVRKEIGALIKNMKGV
NT seq
4620 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgccggccgtcaagcacatggaccccgtcgtcgggatcgacgtgcattccgta
atcgtcacgccggggctgccgccggtgtttctgccgcatccgcatgtcggcttcatgctc
gatctgcgcgaatacgtcgaggccgcgaagggcgtgatcggcagcattgcgatgacgatc
gccgaagaggcggtgcaggactacctgaaggatcaccccgacgacagcaagaaactgacc
aatgcgctcaattcgctcgacaaccaaaagaagcaggccgagcgcgatccgatggtcgcg
gagatgctgaggctcaatcgcgacgtgtcgtcgatcaggggcgacgtggcgaacgcggtg
ggcgcgggcgtcgggatggggggcgcggccggccggccgattttcgtgaacgggctgatg
cgcgcgacggcgggcacgcattcgtttcatgtgccgggcttgcactttccgctcggcgaa
acgttcgcgccgcccgatccgctgccgtccgacgacgccgaatcgtacatgggcagccgc
accgtgctggcgaacaacgatccgatgtcgttcctcgcgctgcccgcgatgagctgctgg
gccgaggggatcgagccgccgccgcacaacggcgcgcatacggcgcgcacgcacgagtcg
atgccgagttcggtgatgctgccgattcctgtcggccgtccggtgctcgtcggcgggccg
cccgtgatgaacatggcggcggccgcgaaggggatgttcaaggcgtttcagggatcgaag
tgggcgaagaagctcgcggacaagctgcatctgaagtcagggttcctgcgatgcacggtg
ctgaaggcggagccggtggacgtgacgacgggcgaagtggtcgtgcagcagaacgacttc
accgtgtccggccggttgccgctcgtgtgggatcgctattacgcgagtcacgatcgccat
gcaggcgcggtgggcttcggctggcggacgcccgccgatatccggctcgagctgatgcgc
aacgaagatggcatcggcgcggctgcttgtttccccgatcatgcgaccgccttcgacatg
gtgccggcggacgacggctggccggcgcgcacgtatgactggcagcatgggcacgcgctg
tatcgcgacgatgggcggatggtgctgcgcacgcgcgagggcatcgaatacggattcgtg
ctgccttcccgttggagagatgccgtcgcggcgctcgatggcgacgattcgcgactcacg
ctgccgatcggccgcatggccgatctcaacggcaacgcgtgggtgttcgagcgtgacgtg
tatggcgggctcgtgcgtctcgtcgaatggaagcgcgacgggcggaccgagcgcgtggtc
gagtgcggcacgggcagcgggctgcacgccgggctgttgacatcgctgacgctgatcgac
gcggacggaaacgcgcatccgctcgtgagctacgagcatgaccgcgagcgcaatctggcg
gcggcgatcgacgcgatggcgcatccgcatcatttcgaatatgcggccgggcatcggatg
gtgagccacacgagcgcgcgcggcgtgtcgttctactacagctaccagcagggcgacgat
ggcgtgtggcgcgtcgatcatgcttggggcgataacgggctgttcgattatcgtttcgtc
tacgatcgcgcgcggatggaaacgcgcgtcaccaattcgctcgggcatacgacgatcacg
cagatgaacgagcgcgggatgcctattgcggaaatcgatccgctaggcggcgtgaccggg
tatcggtatgacacgcaggggcgtgcgagtgcggtgattgatacggcggggcggacgacg
gcgtgggaatacgacgcgtacggcagtttggttgcgcagacgttgccggatggcagtgta
gtgcgcgcggagtatgacgccgacggccggcccgtttgcatcacgatgcctaccgcgcgg
caactgcgctacgagtgggacgagcacggtcatttgcgctcacgcactacgtcttcccgg
gctgtttcgagatacgtgtacgacgcatacgggcaactcgtttcgtacagcggatcgcgt
ggtgcgatcacgcgattcgagtacgatcgcgacggaaatctggcgaccgttacagatgcc
ttggggaatcgtacgcgatatgtgcgcgacgcgcgtggaagagtcgtttggatggccgac
ccgcgcgggcaggtagggctttacgaatatgacggcaacggcaatttgacgagagcggtc
ttgcctggcgggaaagagattcgttgcgagttcgatgacgacggaaacctggttcattat
cgcgaccccgccggccaatcgacaacgttggcgtattcgccgatcgggttggtggaacgc
agaatcgcgccgagcggcggcattgtcgactgccgttacgatacggaggggcaactggtc
ggcgtcgtcaacgaacgtggcgagcagtatgcgcttaaacgcgacccgctaggccggatc
gtgtccgagtcggactattgggggcagacatggcactatcgatacggtggctcaggcgaa
ttgctgtgtagcaccgatccgctcgggcgggtggtcgagtatcagtacgatcgatgcggc
cggatcgtggagaagcttgcgcgggcctctgcggatgacgcatttgtccaggtccatcgc
ttcgcctatgaccagtgtggcaatctgatactcgccgagaacgacgacagccgggtcgag
ttttgccatgatgcggatggacgagtgattgaagaaaaacaaggcgacgactttacgatc
aacaacgtcttcgatgcggccggcaatcgcatcgagcgtcggaccaggcttctatcggaa
ggcgcgctcatcgaacatgtcgttcactatgagtatgacgtcttgaacgccgtggtttcg
attcggatagacggctcggcggcggtcgtcatagaacgcgatgatcttggccaggccgtc
tcagagcgactgggccctgcgctgagacgagcgttttcgtacgaggcgggcgggcagctt
gccgttcagacgctgtttgcatcaaccggcacgatgttcgcaagcgagtatgcgtacgac
ccgaacggcgaggtgatcgaaaagcgcgatgagcgcgggcgcatggagcgcttcgaatat
gattccgtgggacgcgtggtttcgcacctcggcgctcgcggcatcgtgcgccggctcgcc
tatgatctggctggggatctgttgcgaacacgtgtttccggatatggcgcggcggccctt
gccgacgcggaaaaagccgcgaactggattcgcgacggcgaatatgaaggttgttactgt
gcgttcgaccgtgcgggcaatatggttcaccgtcgagatgccgagcagaatctggccttg
tgctgggattcggcgggccaactgcgcgagacgatagcattgcgtccggcaacggctgat
gtggcgtccgctcggaagcgtactcgcacacagtacgaatacgatgcattgcggcggcga
acacgcaagctggtgcaaatcgaatcggaaggcgagccggattcggtgttctcttacgtc
agttgcttcttctgggatggcgatgcgctcgtgggagagcgtacgacaggcggctgggtg
gggcgcgcgggccgcgcagagcaagacgagcgggacgcaacatcgctcgcgccgccgtct
ccagccggctcgaataacggcaactggctgacgttacaatccgatcacgtatgtgagtgg
ttctattacccgcgaacatttcacccgctcggagtcgtgcacggccatcccggcgagaag
cgcgagctcgcgagggcgacggttggttcgccttcgaaggcggatgcaacttatttttac
caaagcgatccgaacggcgcgccggtgcgaatgctcgatgtggagggaaacgtggcttgg
gaggcgagctacgacgccaatggaggcatcgagcaatttggcattcaggcgatgccgcag
ccgcttcgattgcaagggcagtacttcgatgccgagacgggcatgagttacaaccgacat
cgttactacgatgcacggatcggccagttcgtcagcgaagaccctatccgtctgagcggt
ggagagaacttgtaccgctattgcgtcaacagcatatcgtgggcggatcctctcggactc
gatagagttcctttgttcgatccgaacaatcggttgtctttcaatgcgatctgggcatat
acaggcaatctgcccactccgtccgacgtcacggtcgttcggccggcgacaagttgggga
aggaattcgggggttctaaaatggcaggatcattattatgtttttgcaagcgctggtaag
aaatcgcattccgaggacgcgatcattgactttataaaacagcacgatatcaagccgagc
gagattcaaggtttgtatagcatactcagcccgtgcgctgaagagaagaaatcctgtctt
gaaaagaccaaaggcgaagggctggaatttgattggagtttatttcaccagaccgacaac
gtaggttcggaagtcaggaaggagatcggtgcgctgattaagaatatgaagggggtgtga
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