Burkholderia thailandensis 2003015869: DR62_5539
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Entry
DR62_5539 CDS
T03763
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
btha
Burkholderia thailandensis 2003015869
Pathway
btha02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
btha00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
DR62_5539
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
btha03021
]
DR62_5539
Transcription machinery [BR:
btha03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
DR62_5539
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r1_1
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
KIND
Motif
Other DBs
NCBI-ProteinID:
AIP65378
UniProt:
A0AAW9CX16
LinkDB
All DBs
Position
2:385751..387793
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AA seq
680 aa
AA seq
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MTKKLNEVSVDDDANQSDEQPTAASGKGEKAKARDRRAKEKALLKEAFATSTPGTAEELE
ERRTKLRALIKLGKERGFLTYAEINDHLPDNFTETEALEGIIGTFNDMGVAVYEQAPDAE
TLLLNDNAPAASSDDEVEEEAEVALSTVDSEFGRTTDPVRMYMREMGTVELLTREGEIEI
AKRIEDGLRHMVMAISACPTTIADILAMAERVANEEIRVDELVDGLIDPNAADTDGFSEK
DAEEIENEDEEAEEDDEEEEEDDDGAAQATANAAQLEALKRASLEKFALISEWFDKMRRA
FEKEGYKSKSYLKAQETIQNELMSIRFTARTVERLCDTLRAQVDEVRQVERQILHIVVDK
CGMPRSEFIARFPGSETDLDWAEKVAAEGHSYGAILSRNIPAIREQQQRLLDLQARVVLP
LKDLKETNRQMAAGELKARQAKREMTEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMK
AVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKMNRISRQILQET
GLEPDPATLAEKMEMPEDKIRKIMKIAKEPISMETPIGDDDDSHLGDFIEDTNTVAPADA
ALHASMRDVVKDVLDSLTPREAKVLRMRFGIEMSTDHTLEEVGKQFDVTRERIRQIEAKA
LRKLRHPSRSDKLKSFLEGN
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaaaagctgaacgaagtatccgtcgatgacgacgcaaaccagagcgacgaacag
cctaccgctgcgtcgggcaaaggcgaaaaggccaaggcgcgcgatcgccgcgccaaggaa
aaggcgctgctgaaggaagcgttcgcgacgagcacgcccggcacggccgaggagctcgaa
gagcgccgtacgaagctgcgcgcgctgatcaagctcggcaaggagcgcggcttcctcacg
tacgccgaaatcaacgaccatctgccggacaacttcacggaaacggaagcgctcgaaggc
atcatcggcacgttcaacgacatgggcgtcgcggtgtacgagcaggcgcccgacgccgag
acgctgctgttgaacgacaacgcgcccgccgcgtcgtccgacgatgaagtcgaagaggaa
gcggaagtcgcgctgtcgaccgtcgattccgaattcggccgcacgaccgatccggtccgg
atgtacatgcgcgagatgggcacggtcgagctgctcacgcgcgagggcgaaatcgagatc
gcgaagcggatcgaggacggcctgcgccacatggtgatggcgatttccgcgtgcccgacg
acgatcgccgacatcctcgcgatggccgagcgcgtcgcgaacgaggaaattcgcgtcgac
gagctcgtcgacggcctgatcgatccgaacgccgccgataccgacggcttctcggagaag
gacgccgaggaaatcgagaacgaggacgaggaagccgaagaggacgacgaagaggaagaa
gaggacgacgacggcgccgcgcaggcgaccgccaatgcggctcagctcgaagcgctgaag
cgcgcgtcgctcgagaagttcgcgctgatcagcgaatggttcgacaagatgcgccgcgcg
ttcgagaaggaaggctacaagtcgaagtcgtacctgaaggcgcaggaaacgatccagaac
gagctgatgtcgatccgcttcaccgcgcgcaccgtcgagcgtttgtgcgacacgttgcgc
gcgcaggtcgacgaagtgcgtcaggtcgagcgtcagattctgcacatcgtcgtcgacaag
tgcgggatgccgcgctcggaattcatcgcgcgcttcccgggcagcgagaccgatctcgac
tgggcagagaaggtcgcggccgaaggccattcgtacggcgcgatcctgtcgcgcaacatc
ccggcgatccgcgagcagcagcagcgtctgctcgatttgcaggcgcgcgtcgtgctgccg
ctgaaggacctgaaggaaaccaaccgccagatggcggcgggcgaactgaaggcgcgccag
gcgaagcgtgaaatgaccgaggcgaacctgcgtctcgtgatctcgatcgcgaagaagtac
acgaaccgtggcctgcagttcctcgacctgatccaggaaggcaacatcggcctgatgaag
gcggtggacaagttcgaataccgtcgtggctacaaattctcgacctacgcgacgtggtgg
attcgtcaggccatcacgcgctcgatcgcggaccaggcgcgcacgatccgtattccggtt
cacatgatcgagacgatcaacaagatgaaccgcatctcgcggcagatcctgcaggaaacc
ggcctcgagccggacccggctacgcttgccgagaagatggagatgccggaagacaagatc
cgcaagatcatgaagatcgcgaaggagccgatctcgatggaaacgccgatcggcgacgac
gacgattcccatctcggcgacttcatcgaggacaccaacacggtcgcgccggcggatgcc
gcgctgcatgcgagcatgcgcgacgtcgtgaaggacgtgctcgattcgctgacgccgcgt
gaggcgaaggtgctgcggatgcgctttggtatcgaaatgagcaccgatcacacgctcgag
gaagtcggcaagcagttcgacgtcacccgcgagcggattcgtcagatcgaggcgaaggcg
ctgcgcaagctgcgtcatcctagccgttcggacaagctgaagtcgttcctcgaggggaac
tga
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