Burkholderia thailandensis E254: BTN_3179
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Entry
BTN_3179 CDS
T03380
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
bthe
Burkholderia thailandensis E254
Pathway
bthe03410
Base excision repair
bthe03430
Mismatch repair
bthe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bthe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BTN_3179 (recJ)
03430 Mismatch repair
BTN_3179 (recJ)
03440 Homologous recombination
BTN_3179 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bthe03400
]
BTN_3179 (recJ)
DNA repair and recombination proteins [BR:
bthe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
BTN_3179 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
BTN_3179 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
BTN_3179 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Glyco_transf_4
Motif
Other DBs
NCBI-ProteinID:
AIT20036
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Position
1:3583127..3584821
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AA seq
564 aa
AA seq
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MTRIVTRPAVPAALDALARHGLHPVLARLYAARGIASPADVETALSRLVPPAQLKGCADA
AALLADALEAGRKMLVVADYDCDGATACAVAVRGLRMFGAKIDYLVPNRFEYGYGLTPEI
VELAAARKPDLLITVDNGIASVDGVAAANARGIDVLVTDHHLPGDTLPAARAIVNPNQPG
CAFPSKHIAGVGVMFYVLLALRAELRARGAFGDARPEPRLDGLLDLVALGTVADVVRLDG
NNRVLVAQGLQRIRNGRMQPGVAALFRAAARDARSASGFDLGFGLGPRLNAAGRLSDMSL
GIECLTTDDVGRAWELAQQLDAMNRERREIEAGMQQQALADLASVDPAEAATITLFNPEW
HQGVIGIVAGRLKERFHRPAFTFAHADGSGARVKGSGRSIPGFHLRDAIDLISKREPDLI
VTFGGHAMAAGVTLDTGNVPRFAAAFEAVAREWLSDDALARVIETDGDLEDAYFTPQVVE
LLDAAVWGQGFPAPLFSGEFDVASQALVKDKHLKLQLMRGRQRFNAIWFNHAEPLPARAT
LAFRLASDTWNGTTRVQLIVEHAA
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgacccgcatcgtcacccgcccagctgtccccgccgcgctcgacgcgctcgcccgccac
gggctgcatcccgtgctcgcccgcctgtacgcggcgcgcggaatcgcgtcgcccgccgac
gtcgaaaccgcgctgtcgcgcctcgtgccgcccgcgcagctcaaaggctgcgcggacgcc
gccgcgctcctcgccgatgcgctcgaagccggccgcaagatgctcgtcgtcgccgattac
gactgcgacggcgcgaccgcctgcgcggtcgccgtgcgcggcttgcggatgttcggcgcg
aagatcgactacctcgtgccgaaccgcttcgaatacggctacgggctcacgcccgagatc
gtcgagctcgcggccgcgagaaagcccgatctgctgatcaccgtcgacaacggaatcgcg
agcgtcgacggcgtcgcagccgcgaacgcgcgcggcatcgacgtgctcgtcaccgatcac
cacctgcccggcgacacgctgcccgccgcacgcgcgatcgtcaatccgaaccagcccggc
tgcgcgttcccgagcaagcacatcgcgggcgtcggcgtgatgttctacgtgctgctcgcg
ctgcgcgccgagctgcgcgcgcgcggcgcgttcggcgacgcccgccccgagccgcggctc
gacggcctcctcgacctcgtcgcgctcggcacggtggccgacgtcgtgcgcctcgacggc
aacaatcgcgtgctcgtcgcgcagggcctgcagcggattcgcaacggacggatgcagccc
ggcgtcgccgcgctctttcgcgcggccgcgcgcgacgcgcgcagcgcatcgggcttcgat
ctcggcttcggcctcggcccgcgcctgaacgcggcgggccgcctgtcggacatgtcgctc
ggcatcgaatgcctgacgacggacgacgtcggccgcgcatgggagctcgcgcagcagctc
gacgcgatgaaccgcgagcggcgcgagatcgaggccggcatgcagcagcaggcgctcgcc
gatctcgcatcggtcgatcccgccgaagcggcgacgatcacgctcttcaaccccgagtgg
caccagggcgtgatcgggatcgtcgcgggccggctgaaggagcgcttccatcggccggcg
ttcacgttcgcgcacgcggacggcagcggcgcgcgcgtgaagggctccggccgctcgatt
cccggttttcatctgcgcgacgcgatcgacctgatctcgaagcgcgagcccgatctgatc
gtcacgttcggcggccacgcgatggcggcgggcgtcacgctcgacaccgggaacgtgccg
cgctttgccgccgcgttcgaggcggtcgcgcgcgaatggctgtccgacgacgcgctcgcg
cgcgtgatcgagacggacggcgatctcgaggatgcgtacttcacgccgcaggtcgtcgag
ctgctcgatgcggccgtctggggccagggcttcccggcgccccttttctccggcgaattc
gacgtggcgtcgcaggcgctcgtcaaggacaagcacctgaagctgcaattgatgcgcggc
cgccagcgcttcaacgcgatctggttcaaccacgcggagccgctgcccgcgcgcgcgacg
ctcgcgttccggctcgcgagcgatacgtggaacgggacgacacgcgtgcaactgatcgtc
gagcacgccgcataa
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