Burkholderia thailandensis E254: BTN_3960
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Entry
BTN_3960 CDS
T03380
Name
(GenBank) DEAD_2 family protein
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
bthe
Burkholderia thailandensis E254
Pathway
bthe03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bthe00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
BTN_3960
09124 Replication and repair
03420 Nucleotide excision repair
BTN_3960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bthe03021
]
BTN_3960
03036 Chromosome and associated proteins [BR:
bthe03036
]
BTN_3960
03400 DNA repair and recombination proteins [BR:
bthe03400
]
BTN_3960
Enzymes [BR:
bthe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
BTN_3960
Transcription machinery [BR:
bthe03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
BTN_3960
Chromosome and associated proteins [BR:
bthe03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
BTN_3960
DNA repair and recombination proteins [BR:
bthe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
BTN_3960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
HBB
ResIII
DUF3799
Motif
Other DBs
NCBI-ProteinID:
AIT24139
LinkDB
All DBs
Position
2:complement(717350..719608)
Genome browser
AA seq
752 aa
AA seq
DB search
MSYVVAVRAMCEFTAREGDLDLRFTPAPSALEGIAGHATVASRRGAGYEKEVALSGEHRG
LTVRGRADGYDPALNRVEEIKTHRGDLDRMPANQRALHWAQARVYGHLLCESRGLAQLSV
ALVYFDVGTLRETVLTETHTAATLKACFAEQCERFVDWAAREGAHRVARDTALRALAFPH
ARFRSGQRELAVAAYRAARDGRALLAQAPTGIGKTLGTLFPLLKACADAHLDRIFFLTAK
TPGRALALDAADTLRTAAGGALPLRVLELVARDKACEHPDAACHGESCPLARGFYDRLAA
ARAAALEHGRLDRATVRAAALAHGVCPYYLAQELARWCDVVVGDYNYYYDGSALLHALAQ
QNQWRVGVLVDEAHNLLDRARGMYSAALDQRELAGVRKLAPAPLAKALERLNREWNALNR
EQAAAYVVHPDVPPRVLSAAQNLIGRFSELAAQAPLALDAAVQRFCFDAIHFVALAEQFG
AHSIFDATRVRASAPRRAGASILCVRNVIPADFLAPRHGAARATVMFSGTLSPFDFYRDT
LGLPDDAGTLDVEGPFRAEQLTVKVASHVSTRWRDRARSLDPIVELIAAQYAARPGNYLG
FLSSFEYLQQVVARLRERHPALPVWAQAPGMDEAARDGFLARFEPNGRGIGFAVLGGAFS
EGVDLAGDRLIGAFVATLGLPQVNDVNEEMRRAMEARFGRGYDYIYLFPGLRKVVQAAGR
VIRTEHDEGVLHLIDDRFRRGEVRRLLPGGGG
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
gtgagctatgtcgtcgccgtgcgcgcgatgtgcgaattcaccgcgcgcgagggcgatctc
gatctgcgcttcacgccggcgccgagcgcgctcgaaggcatcgccgggcacgcgacggtc
gcgtcgcggcgcggcgccggctacgaaaaggaggtcgcgctttcgggcgagcaccgcggc
ctcacggtgcgcggccgcgcggacggctacgatccggcgctgaaccgcgtcgaggaaatc
aagacgcatcgcggcgatctcgacaggatgcccgccaatcagcgcgcgctgcattgggcg
caggcgcgcgtgtacgggcatctgctgtgcgaatcgcgcgggctcgcgcaactgagcgtc
gcgctcgtctatttcgatgtcgggacgctgcgcgagacggtgctgaccgaaacgcacacg
gccgcgacgctgaaggcatgcttcgcggagcagtgcgagcgcttcgtcgactgggcggcg
cgcgaaggcgcgcatcgcgtcgcgcgcgatacggcgctgcgcgcgctcgcgtttccgcac
gcgcgctttcgcagcggccagcgcgagctcgcggttgcggcctatcgcgccgcgcgcgac
ggccgtgcgctgctcgcgcaggcgccgacgggcatcggcaagacgctcggcacgctgttc
ccgttgctgaaggcatgcgcagacgcgcatctggaccggatcttcttcctgaccgcgaag
acgcccggccgcgcgctcgcgctcgacgcggccgacacgctgcgcacggccgcgggcggc
gcgctgccgctacgcgtgctcgagctcgtcgcgcgcgacaaggcgtgcgagcatccggac
gccgcatgccacggcgaatcgtgtccgctcgcgcgcggcttctacgatcggctcgcggcc
gcgcgcgccgccgcgctcgagcatggccggctcgatcgcgcgaccgtgcgcgcggccgcg
ctcgcgcacggcgtctgcccgtactatctcgcgcaggagctcgcgcgctggtgcgacgtc
gtcgtcggcgactacaactactactacgacggcagcgcgctgctgcacgcgctcgcgcag
cagaaccagtggcgcgtcggcgtgctcgtcgacgaggcgcacaacctgctcgaccgcgcg
cgcgggatgtacagcgcggcgctcgaccagcgcgagctcgccggcgtgcgcaagctcgcc
cccgcgccgctcgcgaaggcgctcgagcgcctgaatcgcgaatggaacgcgctcaatcgc
gaacaggcagccgcatacgtcgtccatccggatgtgccgccgcgcgtgctgtcggccgcg
cagaacctgatcgggcgcttctcggagctcgcagcccaagcgccgctcgcgctcgacgct
gcggtgcagcgcttctgtttcgacgcgattcacttcgtcgcgctcgccgagcagttcggc
gcgcattcgatcttcgatgcgacgcgcgtgcgcgcgagcgcgccgcgccgcgccggcgcg
tcgatcctctgcgtgcgcaacgtgattcccgccgacttcctcgcgccgcgccatggcgcc
gcgcgcgcgaccgtgatgttctcgggcacgctcagcccgttcgatttctaccgcgacacg
ctcgggttgccggacgacgccggcacgctcgacgtcgaagggccgtttcgcgcggagcaa
ctgacagtgaaggtcgcgtcgcacgtatcgacgcgctggcgtgaccgagcgcgctcgctc
gatccgatcgtcgagctgatcgccgcgcagtacgcggcgcggccgggcaactatctcgga
ttcctgagcagcttcgagtatctgcagcaggttgtcgcccggctgcgcgagcgccatccg
gcgctgcccgtctgggcgcaggcgccgggcatggacgaggccgcgcgcgacgggtttctc
gcgcgcttcgagccgaacgggcggggcataggcttcgcggtgctgggcggcgcgttctcg
gagggggtcgatctcgccggcgaccggctgatcggcgcattcgtcgcgacgctcggactg
ccgcaggtcaacgacgtcaacgaggagatgcggcgcgcgatggaggcgcgcttcggccgc
ggctacgactacatctacctgtttccgggtttgcgcaaggtcgtgcaggcagcggggcgg
gtgattcgcaccgagcacgacgagggcgtgctgcatctgatcgacgaccgtttccggcgc
ggcgaggtgcgccggctgttgcccggtggtggcggctga
DBGET
integrated database retrieval system
