Bathymodiolus thermophilus thioautotrophic gill symbiont: MS2017_0486
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Entry
MS2017_0486 CDS
T07716
Name
(GenBank) Penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
bthg
Bathymodiolus thermophilus thioautotrophic gill symbiont
Pathway
bthg00550
Peptidoglycan biosynthesis
bthg01100
Metabolic pathways
bthg01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
bthg00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
MS2017_0486
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
MS2017_0486
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
bthg01011
]
MS2017_0486
Enzymes [BR:
bthg01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
MS2017_0486
Peptidoglycan biosynthesis and degradation proteins [BR:
bthg01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
MS2017_0486
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PBP_dimer_2
DUF8810
Motif
Other DBs
NCBI-ProteinID:
AYQ56228
UniProt:
A0A3G3IKJ3
LinkDB
All DBs
Position
complement(699731..701572)
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AA seq
613 aa
AA seq
DB search
MDKISNAASENKIFSTRLMLALVFIFVLVFILISRLYSLQISNYDYYIEESLGNQMRMLP
ITPIRGKIFDRNGKMIAGNQFAYKLTLTPEKTNNVSETLLLLKKYNFINDKDIEIFNKNK
KRYKKFHSIPLKYKLNEKQVARFLVSNQFIGVDIESYFQRIYPYNASSVHVTGYVSRMNK
KDKALYNKEDYLGTSFVGKTGIEKQYESLLHGKNGKKQIERNVTGRVINTKIIQKATKGT
DLYLSIDLDLQKKAESLLEGKRGAIVAIDVQNGEVLAMVSMPIYNPNWFVNGISHKNYKK
LRTSKDIPQLNRTIQGLYPPGSTIKPMVALIGLEQGTITSHTKTYCPGYFKLKNVKRKFN
DWKRSGHGQVNVRSSIAQSCDVFFYKLANKMGIDSLHDGLKPFNFGEKTGIDLPGERGGI
LPSKAWKKINKKEPWYRGETLIAGIGQGFITASPLQLAVATAALANKGVVIQPKILKSTH
AHGESIKEAKKGIRKQIPIKDIHNWEEVIQGMKQTIYSPRGTARKLNKNLKYTLAGKTGT
AQVFGLDAEEQYIAANLDERLRDHALFTGFAPIKNPKIAIAVIVENAGSGSSKAAPLAKK
LLDVYFEKQSLTQ
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atggataaaattagcaacgctgcgtcagaaaataagattttttctactcgattaatgctc
gcactcgtctttatctttgttttggtttttatcttaatttcaagactttacagcctgcaa
attagcaattacgactattacattgaagaatctttaggcaatcaaatgcgtatgctgcca
attaccccaattcgtggaaaaatctttgaccgcaatggaaaaatgattgctggcaatcaa
ttcgcttataaactcacactcacacctgaaaaaaccaacaatgtctctgaaacattgttg
ttgcttaaaaaatataactttattaacgacaaagatattgaaatttttaataaaaacaaa
aagcgttataaaaaattccacagcataccactcaaatacaaactgaatgaaaaacaagtg
gcaagattcctagttagcaaccagtttattggggttgatattgagtcttattttcaaaga
atttacccttacaacgcctccagcgtccatgtaactggctatgtttccagaatgaacaaa
aaagacaaggcgctttataacaaagaagattatttaggcacttcttttgttggcaaaaca
ggcattgaaaaacaatacgaatcgttattgcatggaaaaaatggaaaaaaacaaattgaa
cgcaatgtaacaggcagagttatcaatacgaaaattattcaaaaagcaacaaaaggcaca
gatttatacctgagtattgacttggatttgcaaaaaaaagcagaatctttacttgaaggc
aagcgtggtgcaattgtggcaattgatgttcagaatggcgaagtgctggcaatggtgagc
atgcctatttacaatcccaattggtttgttaacggcatttcacataaaaattataaaaaa
cttcgaacctcaaaagacattccacaacttaatcgcaccattcaaggcttgtatccacct
gggtcaaccataaagccaatggtggcattaatcggccttgaacaaggcacaattacctct
cacaccaaaacttattgcccagggtattttaaattgaaaaatgttaaacgcaaatttaat
gactggaaacgcagtgggcatgggcaggtcaatgtcagaagttctattgctcaatcttgc
gatgtgttcttttacaaactcgcaaacaagatgggcattgacagcttacacgatggctta
aaaccttttaattttggtgaaaaaacaggcattgatctccccggagagcgtggcggtatt
ctgccctcaaaagcctggaaaaaaatcaacaaaaaagaaccttggtatcgaggagaaact
ttaattgcaggtattggacaaggatttataactgccagccccttgcagttagcagttgcc
acagcagctttggcgaataaaggagtggttattcaacccaaaatactaaaaagtacacat
gcccacggcgagtccattaaagaagcaaaaaaaggcattcggaagcaaattcctattaaa
gatattcacaactgggaagaagtcattcaaggcatgaagcaaaccatttattcgccacga
ggcaccgccagaaaactaaacaaaaacttaaaatacactttggcaggaaaaacaggcaca
gcacaagtatttggcttagacgcagaagagcaatacattgccgcaaacttagatgagcgc
ttgcgtgaccatgcgctatttaccggctttgcacccattaaaaaccctaaaattgccatt
gccgtcattgtagaaaatgcaggtagtggcagctcaaaggcagcaccacttgctaaaaaa
ttgttggatgtttattttgaaaagcaatccttaacccaataa
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