Bathymodiolus thermophilus thioautotrophic gill symbiont: MS2017_0936
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Entry
MS2017_0936 CDS
T07716
Name
(GenBank) Ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
bthg
Bathymodiolus thermophilus thioautotrophic gill symbiont
Pathway
bthg03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
bthg00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
MS2017_0936
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bthg03019
]
MS2017_0936
03009 Ribosome biogenesis [BR:
bthg03009
]
MS2017_0936
03036 Chromosome and associated proteins [BR:
bthg03036
]
MS2017_0936
Enzymes [BR:
bthg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
MS2017_0936
Messenger RNA biogenesis [BR:
bthg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
MS2017_0936
Ribosome biogenesis [BR:
bthg03009
]
Eukaryotic type
90S particles
RNase
MS2017_0936
Prokaryotic type
rRNA processing factors
MS2017_0936
Chromosome and associated proteins [BR:
bthg03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
MS2017_0936
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DND1_DSRM
FUSC-like
DrrA_P4M
Motif
Other DBs
NCBI-ProteinID:
AYQ56655
UniProt:
A0A1J5U4P0
LinkDB
All DBs
Position
1244064..1244726
Genome browser
AA seq
220 aa
AA seq
DB search
MDKLQKKINYQFKDVDLLKQALTHRSVGKSNNERLEFLGDSILGVVVARELYKRFPHIAE
GRLSRFKSYVVRGQTLGLVALDIKLSSLLILGSGELKSGGHNRKSIQADAVEAILGAIFL
EAGFDAVNTVILDLFKKYINEINPNDTLKDFKTQLQERLQKFKQTLPQYELIKTTGKDHN
ALFTVRCLLQDQAIQVEQEAKSIKRAEQMCAEILLDKLKK
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atggataaattacaaaaaaaaattaattatcaatttaaagatgttgacttgttaaagcag
gcattaacacaccgtagtgttggcaaaagcaacaatgagcgtttagaatttttgggcgat
agcatcttgggcgtggtggttgcacgcgagctgtataagcgttttccacatattgctgag
ggtagattgtcgcgctttaaatcctatgtggttagggggcaaactttgggattggttgcg
ctggatattaagttatcaagtttattgattttgggttcgggtgaattaaaaagtggtgga
cataatcgcaaatccattcaagctgatgcggtagaggctattttgggtgcgattttcttg
gaggcaggttttgatgctgtgaataccgtaattttagatttgtttaaaaaatatatcaat
gaaatcaatcccaatgacacgctcaaagattttaaaacccagcttcaagagcgtttacaa
aagttcaagcaaaccttgccacaatatgaactgattaaaaccacaggcaaagaccataac
gcactatttacagttaggtgcctattacaagaccaagcgatacaggtggaacaagaggcc
aaaagtattaaaagagcagaacaaatgtgcgctgaaattttattggataaattaaaaaaa
tga
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